Protein–RNA interactions for Protein: C9JI98

TMEM238, Transmembrane protein 238, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238C9JI98 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TMEM238C9JI98 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TMEM238C9JI98 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TMEM238C9JI98 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TMEM238C9JI98 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC15.33■□□□□ 0.04
TMEM238C9JI98 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
TMEM238C9JI98 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM238C9JI98 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM238C9JI98 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
TMEM238C9JI98 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM238C9JI98 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM238C9JI98 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
TMEM238C9JI98 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TMEM238C9JI98 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM238C9JI98 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC15.32■□□□□ 0.04
TMEM238C9JI98 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC15.32■□□□□ 0.04
TMEM238C9JI98 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM238C9JI98 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM238C9JI98 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
TMEM238C9JI98 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC15.32■□□□□ 0.04
TMEM238C9JI98 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM238C9JI98 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC15.32■□□□□ 0.04
TMEM238C9JI98 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TMEM238C9JI98 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM238C9JI98 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
TMEM238C9JI98 C11orf96-202ENST00000528572 1834 ntBASIC15.31■□□□□ 0.04
TMEM238C9JI98 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TMEM238C9JI98 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC15.31■□□□□ 0.04
TMEM238C9JI98 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TMEM238C9JI98 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM238C9JI98 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC15.31■□□□□ 0.04
TMEM238C9JI98 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM238C9JI98 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM238C9JI98 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM238C9JI98 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM238C9JI98 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM238C9JI98 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
TMEM238C9JI98 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM238C9JI98 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM238C9JI98 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM238C9JI98 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
TMEM238C9JI98 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM238C9JI98 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM238C9JI98 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM238C9JI98 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM238C9JI98 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM238C9JI98 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
TMEM238C9JI98 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM238C9JI98 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM238C9JI98 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM238C9JI98 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM238C9JI98 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM238C9JI98 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC15.3■□□□□ 0.04
TMEM238C9JI98 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM238C9JI98 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM238C9JI98 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM238C9JI98 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM238C9JI98 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM238C9JI98 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM238C9JI98 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
TMEM238C9JI98 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM238C9JI98 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC15.3■□□□□ 0.04
TMEM238C9JI98 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM238C9JI98 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
TMEM238C9JI98 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM238C9JI98 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM238C9JI98 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
TMEM238C9JI98 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM238C9JI98 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM238C9JI98 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TMEM238C9JI98 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC15.29■□□□□ 0.04
TMEM238C9JI98 AC092053.2-201ENST00000640557 1818 ntBASIC15.29■□□□□ 0.04
TMEM238C9JI98 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM238C9JI98 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM238C9JI98 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM238C9JI98 MIR219A2-201ENST00000608502 1504 ntBASIC15.29■□□□□ 0.04
TMEM238C9JI98 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
TMEM238C9JI98 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC15.29■□□□□ 0.04
TMEM238C9JI98 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC15.29■□□□□ 0.04
TMEM238C9JI98 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
TMEM238C9JI98 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC15.29■□□□□ 0.04
TMEM238C9JI98 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC15.29■□□□□ 0.04
TMEM238C9JI98 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC15.29■□□□□ 0.04
TMEM238C9JI98 DUX4L11-201ENST00000611504 1267 ntBASIC15.29■□□□□ 0.04
TMEM238C9JI98 DUX4L12-201ENST00000614593 1267 ntBASIC15.29■□□□□ 0.04
TMEM238C9JI98 DUX4L14-201ENST00000621227 1267 ntBASIC15.29■□□□□ 0.04
TMEM238C9JI98 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM238C9JI98 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC15.29■□□□□ 0.04
TMEM238C9JI98 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM238C9JI98 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM238C9JI98 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC15.29■□□□□ 0.04
TMEM238C9JI98 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM238C9JI98 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TMEM238C9JI98 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM238C9JI98 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM238C9JI98 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM238C9JI98 COMT-203ENST00000403184 2217 ntTSL 2 BASIC15.28■□□□□ 0.04
TMEM238C9JI98 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
TMEM238C9JI98 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM238C9JI98 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms