Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.82■■□□□ 1.08
CCDC189A1A4V9 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.82■■□□□ 1.08
CCDC189A1A4V9 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.82■■□□□ 1.08
CCDC189A1A4V9 DUX4L4-201ENST00000566884 1269 ntBASIC21.82■■□□□ 1.08
CCDC189A1A4V9 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC189A1A4V9 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC189A1A4V9 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC189A1A4V9 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
CCDC189A1A4V9 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC189A1A4V9 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
CCDC189A1A4V9 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC189A1A4V9 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC189A1A4V9 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC189A1A4V9 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC189A1A4V9 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
CCDC189A1A4V9 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.81■■□□□ 1.08
CCDC189A1A4V9 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC189A1A4V9 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC189A1A4V9 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC189A1A4V9 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC189A1A4V9 LINC00526-201ENST00000581067 1875 ntBASIC21.81■■□□□ 1.08
CCDC189A1A4V9 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
CCDC189A1A4V9 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC189A1A4V9 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.8■■□□□ 1.08
CCDC189A1A4V9 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
CCDC189A1A4V9 AC242852.2-201ENST00000615738 1807 ntBASIC21.8■■□□□ 1.08
CCDC189A1A4V9 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.8■■□□□ 1.08
CCDC189A1A4V9 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC189A1A4V9 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC189A1A4V9 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC189A1A4V9 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC189A1A4V9 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
CCDC189A1A4V9 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC189A1A4V9 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC189A1A4V9 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.8■■□□□ 1.08
CCDC189A1A4V9 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC189A1A4V9 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.8■■□□□ 1.08
CCDC189A1A4V9 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.8■■□□□ 1.08
CCDC189A1A4V9 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
CCDC189A1A4V9 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
CCDC189A1A4V9 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
CCDC189A1A4V9 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC189A1A4V9 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.79■■□□□ 1.08
CCDC189A1A4V9 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.79■■□□□ 1.08
CCDC189A1A4V9 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC189A1A4V9 AC009086.3-201ENST00000623486 1008 ntBASIC21.79■■□□□ 1.08
CCDC189A1A4V9 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.79■■□□□ 1.08
CCDC189A1A4V9 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.79■■□□□ 1.08
CCDC189A1A4V9 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.79■■□□□ 1.08
CCDC189A1A4V9 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC189A1A4V9 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC189A1A4V9 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC189A1A4V9 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC189A1A4V9 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
CCDC189A1A4V9 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.78■■□□□ 1.08
CCDC189A1A4V9 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
CCDC189A1A4V9 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CCDC189A1A4V9 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
CCDC189A1A4V9 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC189A1A4V9 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.78■■□□□ 1.08
CCDC189A1A4V9 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC189A1A4V9 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC21.78■■□□□ 1.08
CCDC189A1A4V9 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.78■■□□□ 1.08
CCDC189A1A4V9 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC189A1A4V9 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC189A1A4V9 AC007952.6-201ENST00000573168 2673 ntBASIC21.77■■□□□ 1.08
CCDC189A1A4V9 AC003957.1-201ENST00000625108 2673 ntBASIC21.77■■□□□ 1.08
CCDC189A1A4V9 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.77■■□□□ 1.08
CCDC189A1A4V9 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC189A1A4V9 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC189A1A4V9 MCC-208ENST00000514701 2855 ntTSL 2 BASIC21.77■■□□□ 1.08
CCDC189A1A4V9 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.77■■□□□ 1.08
CCDC189A1A4V9 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC189A1A4V9 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC189A1A4V9 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.07
CCDC189A1A4V9 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC21.77■■□□□ 1.07
CCDC189A1A4V9 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC189A1A4V9 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC189A1A4V9 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC189A1A4V9 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC189A1A4V9 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC21.76■■□□□ 1.07
CCDC189A1A4V9 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC189A1A4V9 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.76■■□□□ 1.07
CCDC189A1A4V9 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
CCDC189A1A4V9 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.76■■□□□ 1.07
CCDC189A1A4V9 MTDHP2-201ENST00000601468 714 ntBASIC21.76■■□□□ 1.07
CCDC189A1A4V9 MIR4787-201ENST00000607364 84 ntBASIC21.76■■□□□ 1.07
CCDC189A1A4V9 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CCDC189A1A4V9 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC189A1A4V9 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC189A1A4V9 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC189A1A4V9 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC189A1A4V9 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
CCDC189A1A4V9 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC189A1A4V9 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC189A1A4V9 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.75■■□□□ 1.07
CCDC189A1A4V9 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.75■■□□□ 1.07
CCDC189A1A4V9 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC189A1A4V9 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC189A1A4V9 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms