Protein–RNA interactions for Protein: A0PK11

CLRN2, Clarin-2, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN2A0PK11 KRT19P1-201ENST00000405746 1186 ntBASIC26.23■■□□□ 1.79
CLRN2A0PK11 CROCCP5-201ENST00000436658 830 ntBASIC26.23■■□□□ 1.79
CLRN2A0PK11 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC26.23■■□□□ 1.79
CLRN2A0PK11 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC26.23■■□□□ 1.79
CLRN2A0PK11 AC068587.7-201ENST00000641602 218 ntBASIC26.23■■□□□ 1.79
CLRN2A0PK11 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC26.23■■□□□ 1.79
CLRN2A0PK11 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC26.23■■□□□ 1.79
CLRN2A0PK11 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC26.22■■□□□ 1.79
CLRN2A0PK11 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC26.22■■□□□ 1.79
CLRN2A0PK11 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
CLRN2A0PK11 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
CLRN2A0PK11 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC26.22■■□□□ 1.79
CLRN2A0PK11 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC26.22■■□□□ 1.79
CLRN2A0PK11 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC26.22■■□□□ 1.79
CLRN2A0PK11 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CLRN2A0PK11 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
CLRN2A0PK11 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC26.21■■□□□ 1.79
CLRN2A0PK11 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC26.21■■□□□ 1.79
CLRN2A0PK11 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC26.21■■□□□ 1.79
CLRN2A0PK11 AC006970.2-201ENST00000450065 779 ntBASIC26.21■■□□□ 1.79
CLRN2A0PK11 EMC9-206ENST00000560403 872 ntTSL 2 BASIC26.21■■□□□ 1.79
CLRN2A0PK11 AC087239.1-201ENST00000622671 572 ntBASIC26.21■■□□□ 1.79
CLRN2A0PK11 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
CLRN2A0PK11 LINC00543-201ENST00000567234 1845 ntBASIC26.21■■□□□ 1.79
CLRN2A0PK11 H19-210ENST00000439725 1929 ntTSL 2 BASIC26.2■■□□□ 1.79
CLRN2A0PK11 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CLRN2A0PK11 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC26.2■■□□□ 1.78
CLRN2A0PK11 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC26.2■■□□□ 1.78
CLRN2A0PK11 TESC-206ENST00000541210 936 ntTSL 3 BASIC26.2■■□□□ 1.78
CLRN2A0PK11 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC26.2■■□□□ 1.78
CLRN2A0PK11 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
CLRN2A0PK11 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC26.2■■□□□ 1.78
CLRN2A0PK11 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CLRN2A0PK11 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CLRN2A0PK11 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC26.19■■□□□ 1.78
CLRN2A0PK11 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC26.19■■□□□ 1.78
CLRN2A0PK11 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CLRN2A0PK11 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CLRN2A0PK11 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CLRN2A0PK11 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
CLRN2A0PK11 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC26.19■■□□□ 1.78
CLRN2A0PK11 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC26.19■■□□□ 1.78
CLRN2A0PK11 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC26.19■■□□□ 1.78
CLRN2A0PK11 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC26.19■■□□□ 1.78
CLRN2A0PK11 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
CLRN2A0PK11 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
CLRN2A0PK11 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC26.19■■□□□ 1.78
CLRN2A0PK11 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CLRN2A0PK11 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
CLRN2A0PK11 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
CLRN2A0PK11 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CLRN2A0PK11 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CLRN2A0PK11 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CLRN2A0PK11 AL355802.2-201ENST00000402069 882 ntBASIC26.18■■□□□ 1.78
CLRN2A0PK11 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC26.18■■□□□ 1.78
CLRN2A0PK11 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC26.18■■□□□ 1.78
CLRN2A0PK11 SPI1-203ENST00000533030 661 ntTSL 2 BASIC26.18■■□□□ 1.78
CLRN2A0PK11 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC26.18■■□□□ 1.78
CLRN2A0PK11 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
CLRN2A0PK11 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC26.18■■□□□ 1.78
CLRN2A0PK11 AC011767.1-201ENST00000617410 1153 ntBASIC26.18■■□□□ 1.78
CLRN2A0PK11 ESRRAP2-201ENST00000418437 1549 ntBASIC26.18■■□□□ 1.78
CLRN2A0PK11 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
CLRN2A0PK11 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CLRN2A0PK11 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
CLRN2A0PK11 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
CLRN2A0PK11 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
CLRN2A0PK11 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC26.17■■□□□ 1.78
CLRN2A0PK11 AL109923.1-201ENST00000618799 583 ntBASIC26.17■■□□□ 1.78
CLRN2A0PK11 ABCB10P4-201ENST00000566803 2184 ntBASIC26.17■■□□□ 1.78
CLRN2A0PK11 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC26.17■■□□□ 1.78
CLRN2A0PK11 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
CLRN2A0PK11 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CLRN2A0PK11 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CLRN2A0PK11 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
CLRN2A0PK11 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
CLRN2A0PK11 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
CLRN2A0PK11 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CLRN2A0PK11 AC079140.4-201ENST00000507448 529 ntBASIC26.16■■□□□ 1.78
CLRN2A0PK11 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC26.16■■□□□ 1.78
CLRN2A0PK11 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CLRN2A0PK11 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC26.16■■□□□ 1.78
CLRN2A0PK11 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC26.16■■□□□ 1.78
CLRN2A0PK11 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC26.15■■□□□ 1.78
CLRN2A0PK11 ASL-203ENST00000380839 1765 ntTSL 5 BASIC26.15■■□□□ 1.78
CLRN2A0PK11 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC26.15■■□□□ 1.78
CLRN2A0PK11 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CLRN2A0PK11 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
CLRN2A0PK11 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC26.15■■□□□ 1.78
CLRN2A0PK11 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
CLRN2A0PK11 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC26.15■■□□□ 1.78
CLRN2A0PK11 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
CLRN2A0PK11 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC26.15■■□□□ 1.78
CLRN2A0PK11 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC26.15■■□□□ 1.78
CLRN2A0PK11 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CLRN2A0PK11 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CLRN2A0PK11 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
CLRN2A0PK11 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CLRN2A0PK11 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC26.15■■□□□ 1.78
CLRN2A0PK11 OXCT2P1-201ENST00000447263 1535 ntBASIC26.14■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms