Protein–RNA interactions for Protein: A0A1W2PRY6

SMIM27, Small integral membrane protein 27 (Fragment), humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM27A0A1W2PRY6 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMIM27A0A1W2PRY6 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
SMIM27A0A1W2PRY6 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SMIM27A0A1W2PRY6 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC16.38■□□□□ 0.21
SMIM27A0A1W2PRY6 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC16.38■□□□□ 0.21
SMIM27A0A1W2PRY6 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC16.38■□□□□ 0.21
SMIM27A0A1W2PRY6 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMIM27A0A1W2PRY6 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC16.38■□□□□ 0.21
SMIM27A0A1W2PRY6 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SMIM27A0A1W2PRY6 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SMIM27A0A1W2PRY6 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC16.37■□□□□ 0.21
SMIM27A0A1W2PRY6 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SMIM27A0A1W2PRY6 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SMIM27A0A1W2PRY6 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SMIM27A0A1W2PRY6 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SMIM27A0A1W2PRY6 GFER-205ENST00000569451 517 ntTSL 5 BASIC16.37■□□□□ 0.21
SMIM27A0A1W2PRY6 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SMIM27A0A1W2PRY6 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
SMIM27A0A1W2PRY6 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SMIM27A0A1W2PRY6 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
SMIM27A0A1W2PRY6 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SMIM27A0A1W2PRY6 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
SMIM27A0A1W2PRY6 AF106564.1-201ENST00000607058 2553 ntBASIC16.36■□□□□ 0.21
SMIM27A0A1W2PRY6 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SMIM27A0A1W2PRY6 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
SMIM27A0A1W2PRY6 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SMIM27A0A1W2PRY6 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SMIM27A0A1W2PRY6 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SMIM27A0A1W2PRY6 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
SMIM27A0A1W2PRY6 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
SMIM27A0A1W2PRY6 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
SMIM27A0A1W2PRY6 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
SMIM27A0A1W2PRY6 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SMIM27A0A1W2PRY6 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SMIM27A0A1W2PRY6 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SMIM27A0A1W2PRY6 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SMIM27A0A1W2PRY6 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SMIM27A0A1W2PRY6 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
SMIM27A0A1W2PRY6 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SMIM27A0A1W2PRY6 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
SMIM27A0A1W2PRY6 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC16.35■□□□□ 0.21
SMIM27A0A1W2PRY6 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
SMIM27A0A1W2PRY6 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
SMIM27A0A1W2PRY6 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SMIM27A0A1W2PRY6 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
SMIM27A0A1W2PRY6 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SMIM27A0A1W2PRY6 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
SMIM27A0A1W2PRY6 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC16.35■□□□□ 0.21
SMIM27A0A1W2PRY6 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SMIM27A0A1W2PRY6 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SMIM27A0A1W2PRY6 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SMIM27A0A1W2PRY6 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SMIM27A0A1W2PRY6 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
SMIM27A0A1W2PRY6 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SMIM27A0A1W2PRY6 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
SMIM27A0A1W2PRY6 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC16.35■□□□□ 0.21
SMIM27A0A1W2PRY6 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SMIM27A0A1W2PRY6 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SMIM27A0A1W2PRY6 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMIM27A0A1W2PRY6 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMIM27A0A1W2PRY6 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMIM27A0A1W2PRY6 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMIM27A0A1W2PRY6 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SMIM27A0A1W2PRY6 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SMIM27A0A1W2PRY6 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SMIM27A0A1W2PRY6 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMIM27A0A1W2PRY6 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC16.34■□□□□ 0.21
SMIM27A0A1W2PRY6 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMIM27A0A1W2PRY6 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMIM27A0A1W2PRY6 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMIM27A0A1W2PRY6 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMIM27A0A1W2PRY6 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMIM27A0A1W2PRY6 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SMIM27A0A1W2PRY6 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
SMIM27A0A1W2PRY6 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
SMIM27A0A1W2PRY6 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC16.33■□□□□ 0.21
SMIM27A0A1W2PRY6 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SMIM27A0A1W2PRY6 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SMIM27A0A1W2PRY6 LINC01006-201ENST00000333319 2292 ntBASIC16.33■□□□□ 0.2
SMIM27A0A1W2PRY6 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SMIM27A0A1W2PRY6 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC16.33■□□□□ 0.2
SMIM27A0A1W2PRY6 AC007029.1-201ENST00000604183 313 ntBASIC16.33■□□□□ 0.2
SMIM27A0A1W2PRY6 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC16.33■□□□□ 0.2
SMIM27A0A1W2PRY6 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
SMIM27A0A1W2PRY6 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
SMIM27A0A1W2PRY6 AC144652.1-201ENST00000609974 1624 ntBASIC16.33■□□□□ 0.2
SMIM27A0A1W2PRY6 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC16.33■□□□□ 0.2
SMIM27A0A1W2PRY6 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SMIM27A0A1W2PRY6 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SMIM27A0A1W2PRY6 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SMIM27A0A1W2PRY6 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMIM27A0A1W2PRY6 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMIM27A0A1W2PRY6 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMIM27A0A1W2PRY6 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SMIM27A0A1W2PRY6 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SMIM27A0A1W2PRY6 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
SMIM27A0A1W2PRY6 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC16.32■□□□□ 0.2
SMIM27A0A1W2PRY6 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMIM27A0A1W2PRY6 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
SMIM27A0A1W2PRY6 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms