Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV18A0A075B6X5 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TRAV18A0A075B6X5 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV18A0A075B6X5 AF131216.4-201ENST00000638924 1588 ntBASIC18.81■□□□□ 0.6
TRAV18A0A075B6X5 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV18A0A075B6X5 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV18A0A075B6X5 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV18A0A075B6X5 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.8■□□□□ 0.6
TRAV18A0A075B6X5 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV18A0A075B6X5 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC18.8■□□□□ 0.6
TRAV18A0A075B6X5 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
TRAV18A0A075B6X5 AC005229.4-201ENST00000610085 2198 ntBASIC18.8■□□□□ 0.6
TRAV18A0A075B6X5 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV18A0A075B6X5 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV18A0A075B6X5 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV18A0A075B6X5 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV18A0A075B6X5 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC18.8■□□□□ 0.6
TRAV18A0A075B6X5 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
TRAV18A0A075B6X5 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.79■□□□□ 0.6
TRAV18A0A075B6X5 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
TRAV18A0A075B6X5 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV18A0A075B6X5 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV18A0A075B6X5 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
TRAV18A0A075B6X5 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV18A0A075B6X5 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV18A0A075B6X5 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC18.79■□□□□ 0.6
TRAV18A0A075B6X5 AC120024.1-201ENST00000562672 995 ntBASIC18.79■□□□□ 0.6
TRAV18A0A075B6X5 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV18A0A075B6X5 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
TRAV18A0A075B6X5 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
TRAV18A0A075B6X5 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV18A0A075B6X5 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV18A0A075B6X5 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV18A0A075B6X5 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.78■□□□□ 0.6
TRAV18A0A075B6X5 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
TRAV18A0A075B6X5 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV18A0A075B6X5 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC18.78■□□□□ 0.6
TRAV18A0A075B6X5 AC129492.7-201ENST00000622992 756 ntBASIC18.78■□□□□ 0.6
TRAV18A0A075B6X5 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
TRAV18A0A075B6X5 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV18A0A075B6X5 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.78■□□□□ 0.6
TRAV18A0A075B6X5 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.78■□□□□ 0.6
TRAV18A0A075B6X5 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV18A0A075B6X5 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV18A0A075B6X5 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV18A0A075B6X5 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
TRAV18A0A075B6X5 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV18A0A075B6X5 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV18A0A075B6X5 AC019171.1-201ENST00000601251 1056 ntBASIC18.77■□□□□ 0.6
TRAV18A0A075B6X5 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
TRAV18A0A075B6X5 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV18A0A075B6X5 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV18A0A075B6X5 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV18A0A075B6X5 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC18.77■□□□□ 0.59
TRAV18A0A075B6X5 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
TRAV18A0A075B6X5 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TRAV18A0A075B6X5 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.77■□□□□ 0.59
TRAV18A0A075B6X5 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV18A0A075B6X5 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV18A0A075B6X5 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV18A0A075B6X5 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV18A0A075B6X5 ABHD17AP3-201ENST00000503096 1137 ntBASIC18.76■□□□□ 0.59
TRAV18A0A075B6X5 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC18.76■□□□□ 0.59
TRAV18A0A075B6X5 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV18A0A075B6X5 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.76■□□□□ 0.59
TRAV18A0A075B6X5 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.76■□□□□ 0.59
TRAV18A0A075B6X5 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV18A0A075B6X5 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV18A0A075B6X5 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV18A0A075B6X5 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
TRAV18A0A075B6X5 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV18A0A075B6X5 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
TRAV18A0A075B6X5 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV18A0A075B6X5 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
TRAV18A0A075B6X5 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.75■□□□□ 0.59
TRAV18A0A075B6X5 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.75■□□□□ 0.59
TRAV18A0A075B6X5 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV18A0A075B6X5 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC18.75■□□□□ 0.59
TRAV18A0A075B6X5 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.75■□□□□ 0.59
TRAV18A0A075B6X5 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.75■□□□□ 0.59
TRAV18A0A075B6X5 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV18A0A075B6X5 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
TRAV18A0A075B6X5 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.74■□□□□ 0.59
TRAV18A0A075B6X5 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
TRAV18A0A075B6X5 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV18A0A075B6X5 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV18A0A075B6X5 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV18A0A075B6X5 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV18A0A075B6X5 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV18A0A075B6X5 MTX2-204ENST00000443241 799 ntTSL 3 BASIC18.74■□□□□ 0.59
TRAV18A0A075B6X5 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
TRAV18A0A075B6X5 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
TRAV18A0A075B6X5 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV18A0A075B6X5 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV18A0A075B6X5 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.74■□□□□ 0.59
TRAV18A0A075B6X5 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV18A0A075B6X5 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.74■□□□□ 0.59
TRAV18A0A075B6X5 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV18A0A075B6X5 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
TRAV18A0A075B6X5 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms