Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 BX005040.1-201ENST00000622281 1126 ntTSL 5 BASIC19.18■□□□□ 0.66
RIMBP3Q9UFD9 PID1-203ENST00000392055 2533 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
RIMBP3Q9UFD9 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RIMBP3Q9UFD9 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RIMBP3Q9UFD9 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
RIMBP3Q9UFD9 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RIMBP3Q9UFD9 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RIMBP3Q9UFD9 DBF4B-202ENST00000393547 1810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RIMBP3Q9UFD9 GALK2-212ENST00000559454 1768 ntTSL 5 BASIC19.18■□□□□ 0.66
RIMBP3Q9UFD9 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RIMBP3Q9UFD9 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RIMBP3Q9UFD9 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
RIMBP3Q9UFD9 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RIMBP3Q9UFD9 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RIMBP3Q9UFD9 KIF9-208ENST00000452770 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RIMBP3Q9UFD9 SGO1-AS1-204ENST00000634618 2371 ntTSL 5 BASIC19.18■□□□□ 0.66
RIMBP3Q9UFD9 FMO1-203ENST00000402921 2003 ntTSL 2 BASIC19.18■□□□□ 0.66
RIMBP3Q9UFD9 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RIMBP3Q9UFD9 DRICH1-201ENST00000317749 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RIMBP3Q9UFD9 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RIMBP3Q9UFD9 FGF1-203ENST00000360966 695 ntTSL 2 BASIC19.18■□□□□ 0.66
RIMBP3Q9UFD9 MICD-202ENST00000413248 813 ntBASIC19.18■□□□□ 0.66
RIMBP3Q9UFD9 AL355490.2-201ENST00000422848 548 ntTSL 3 BASIC19.18■□□□□ 0.66
RIMBP3Q9UFD9 NPC2-202ENST00000434013 875 ntTSL 2 BASIC19.18■□□□□ 0.66
RIMBP3Q9UFD9 AL132671.2-201ENST00000467125 930 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
RIMBP3Q9UFD9 AC087354.1-201ENST00000522373 1037 ntTSL 5 BASIC19.18■□□□□ 0.66
RIMBP3Q9UFD9 MIR4274-201ENST00000579577 91 ntBASIC19.18■□□□□ 0.66
RIMBP3Q9UFD9 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RIMBP3Q9UFD9 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RIMBP3Q9UFD9 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RIMBP3Q9UFD9 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RIMBP3Q9UFD9 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC19.17■□□□□ 0.66
RIMBP3Q9UFD9 NOBOX-202ENST00000483238 1980 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
RIMBP3Q9UFD9 SH2D4A-202ENST00000518040 1697 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
RIMBP3Q9UFD9 SLC9A3P3-201ENST00000457608 2229 ntBASIC19.17■□□□□ 0.66
RIMBP3Q9UFD9 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
RIMBP3Q9UFD9 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
RIMBP3Q9UFD9 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
RIMBP3Q9UFD9 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
RIMBP3Q9UFD9 AACS-201ENST00000316519 3316 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RIMBP3Q9UFD9 RN7SKP194-201ENST00000411328 351 ntBASIC19.17■□□□□ 0.66
RIMBP3Q9UFD9 AL121672.2-201ENST00000412643 867 ntTSL 3 BASIC19.17■□□□□ 0.66
RIMBP3Q9UFD9 SLC25A6P3-201ENST00000424829 879 ntBASIC19.17■□□□□ 0.66
RIMBP3Q9UFD9 AL390786.1-201ENST00000432108 309 ntTSL 5 BASIC19.17■□□□□ 0.66
RIMBP3Q9UFD9 MAX-213ENST00000556443 585 ntTSL 2 BASIC19.17■□□□□ 0.66
RIMBP3Q9UFD9 MAX-216ENST00000556979 615 ntTSL 3 BASIC19.17■□□□□ 0.66
RIMBP3Q9UFD9 FOXC2-AS1-201ENST00000563280 319 ntTSL 3 BASIC19.17■□□□□ 0.66
RIMBP3Q9UFD9 AC136944.3-201ENST00000568520 554 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RIMBP3Q9UFD9 AC145207.4-201ENST00000583521 450 ntTSL 5 BASIC19.17■□□□□ 0.66
RIMBP3Q9UFD9 MIR6753-201ENST00000617169 164 ntBASIC19.17■□□□□ 0.66
RIMBP3Q9UFD9 UBXN8-209ENST00000620074 1058 ntTSL 5 BASIC19.17■□□□□ 0.66
RIMBP3Q9UFD9 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
RIMBP3Q9UFD9 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
RIMBP3Q9UFD9 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
RIMBP3Q9UFD9 PLAG1-202ENST00000423799 1684 ntTSL 2 BASIC19.17■□□□□ 0.66
RIMBP3Q9UFD9 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
RIMBP3Q9UFD9 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RIMBP3Q9UFD9 IMPDH1P10-201ENST00000440965 1542 ntBASIC19.16■□□□□ 0.66
RIMBP3Q9UFD9 CAV2-203ENST00000393480 1179 ntTSL 2 BASIC19.16■□□□□ 0.66
RIMBP3Q9UFD9 AL591479.1-201ENST00000417001 635 ntBASIC19.16■□□□□ 0.66
RIMBP3Q9UFD9 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RIMBP3Q9UFD9 AC106806.1-201ENST00000466718 561 ntBASIC19.16■□□□□ 0.66
RIMBP3Q9UFD9 GUSBP8-201ENST00000502652 679 ntBASIC19.16■□□□□ 0.66
RIMBP3Q9UFD9 AC106788.1-202ENST00000548889 1212 ntBASIC19.16■□□□□ 0.66
RIMBP3Q9UFD9 AL136018.1-201ENST00000557736 636 ntTSL 4 BASIC19.16■□□□□ 0.66
RIMBP3Q9UFD9 AC005609.5-202ENST00000624176 513 ntTSL 4 BASIC19.16■□□□□ 0.66
RIMBP3Q9UFD9 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
RIMBP3Q9UFD9 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RIMBP3Q9UFD9 DPH2-201ENST00000255108 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RIMBP3Q9UFD9 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RIMBP3Q9UFD9 MKNK1-201ENST00000341183 2612 ntTSL 5 BASIC19.16■□□□□ 0.66
RIMBP3Q9UFD9 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC19.16■□□□□ 0.66
RIMBP3Q9UFD9 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
RIMBP3Q9UFD9 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC19.16■□□□□ 0.66
RIMBP3Q9UFD9 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RIMBP3Q9UFD9 FMO11P-201ENST00000424742 1370 ntBASIC19.16■□□□□ 0.66
RIMBP3Q9UFD9 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RIMBP3Q9UFD9 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
RIMBP3Q9UFD9 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
RIMBP3Q9UFD9 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RIMBP3Q9UFD9 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
RIMBP3Q9UFD9 AC092118.1-203ENST00000335616 1317 ntTSL 2 BASIC19.15■□□□□ 0.66
RIMBP3Q9UFD9 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
RIMBP3Q9UFD9 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
RIMBP3Q9UFD9 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RIMBP3Q9UFD9 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC19.15■□□□□ 0.66
RIMBP3Q9UFD9 CFDP1-201ENST00000283882 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RIMBP3Q9UFD9 DHPS-202ENST00000351660 1090 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RIMBP3Q9UFD9 GHRL-205ENST00000429122 793 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
RIMBP3Q9UFD9 MEIS1-AS2-202ENST00000454595 586 ntTSL 2 BASIC19.15■□□□□ 0.66
RIMBP3Q9UFD9 GHRL-211ENST00000457360 855 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
RIMBP3Q9UFD9 AC090955.1-201ENST00000458338 235 ntBASIC19.15■□□□□ 0.66
RIMBP3Q9UFD9 RN7SL210P-201ENST00000484688 288 ntBASIC19.15■□□□□ 0.66
RIMBP3Q9UFD9 AC116359.1-201ENST00000510731 1099 ntBASIC19.15■□□□□ 0.66
RIMBP3Q9UFD9 AC034154.1-202ENST00000518105 691 ntTSL 3 BASIC19.15■□□□□ 0.66
RIMBP3Q9UFD9 PTTG4P-201ENST00000556391 352 ntBASIC19.15■□□□□ 0.66
RIMBP3Q9UFD9 RAB11A-204ENST00000565075 711 ntTSL 2 BASIC19.15■□□□□ 0.66
RIMBP3Q9UFD9 AC008738.2-201ENST00000593041 404 ntTSL 5 BASIC19.15■□□□□ 0.66
RIMBP3Q9UFD9 ZNF563-203ENST00000595977 958 ntTSL 5 BASIC19.15■□□□□ 0.66
RIMBP3Q9UFD9 AL035420.3-201ENST00000619647 321 ntBASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms