Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 TRO-203ENST00000375022 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
PRICKLE4Q2TBC4 ABCB9-211ENST00000540285 3330 ntTSL 2 BASIC12.08□□□□□ -0.48
PRICKLE4Q2TBC4 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
PRICKLE4Q2TBC4 NBPF13P-201ENST00000444082 1783 ntBASIC12.07□□□□□ -0.48
PRICKLE4Q2TBC4 RB1-201ENST00000267163 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PRICKLE4Q2TBC4 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PRICKLE4Q2TBC4 HLF-202ENST00000430986 1385 ntTSL 2 BASIC12.07□□□□□ -0.48
PRICKLE4Q2TBC4 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC12.07□□□□□ -0.48
PRICKLE4Q2TBC4 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
PRICKLE4Q2TBC4 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PRICKLE4Q2TBC4 CPNE1-201ENST00000317677 1961 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
PRICKLE4Q2TBC4 CHAT-202ENST00000339797 2124 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
PRICKLE4Q2TBC4 CHAT-204ENST00000395559 2114 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
PRICKLE4Q2TBC4 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PRICKLE4Q2TBC4 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC12.07□□□□□ -0.48
PRICKLE4Q2TBC4 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
PRICKLE4Q2TBC4 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PRICKLE4Q2TBC4 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
PRICKLE4Q2TBC4 SPTLC1-201ENST00000262554 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PRICKLE4Q2TBC4 PSMC5-201ENST00000310144 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PRICKLE4Q2TBC4 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
PRICKLE4Q2TBC4 VASH2-205ENST00000366967 1206 ntTSL 2 BASIC12.07□□□□□ -0.48
PRICKLE4Q2TBC4 ARPC5-203ENST00000367534 622 ntTSL 3 BASIC12.07□□□□□ -0.48
PRICKLE4Q2TBC4 LDB3-203ENST00000372056 1868 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
PRICKLE4Q2TBC4 RBMXP1-201ENST00000408004 1191 ntBASIC12.07□□□□□ -0.48
PRICKLE4Q2TBC4 AC092570.1-201ENST00000414446 469 ntBASIC12.07□□□□□ -0.48
PRICKLE4Q2TBC4 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC12.07□□□□□ -0.48
PRICKLE4Q2TBC4 HCG27-204ENST00000424675 895 ntTSL 3 BASIC12.07□□□□□ -0.48
PRICKLE4Q2TBC4 AL358876.2-201ENST00000424689 477 ntTSL 3 BASIC12.07□□□□□ -0.48
PRICKLE4Q2TBC4 AL929302.1-201ENST00000426556 871 ntBASIC12.07□□□□□ -0.48
PRICKLE4Q2TBC4 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC12.07□□□□□ -0.48
PRICKLE4Q2TBC4 TGOLN2-206ENST00000444342 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
PRICKLE4Q2TBC4 RPSAP16-201ENST00000447583 821 ntBASIC12.07□□□□□ -0.48
PRICKLE4Q2TBC4 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
PRICKLE4Q2TBC4 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC12.07□□□□□ -0.48
PRICKLE4Q2TBC4 PRKRIP1-202ENST00000462601 884 ntTSL 2 BASIC12.07□□□□□ -0.48
PRICKLE4Q2TBC4 RN7SL684P-201ENST00000465665 294 ntBASIC12.07□□□□□ -0.48
PRICKLE4Q2TBC4 HNRNPA3P6-201ENST00000472163 1006 ntBASIC12.07□□□□□ -0.48
PRICKLE4Q2TBC4 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
PRICKLE4Q2TBC4 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC12.07□□□□□ -0.48
PRICKLE4Q2TBC4 IL32-230ENST00000551122 733 ntAPPRIS ALT2 TSL 3 BASIC12.07□□□□□ -0.48
PRICKLE4Q2TBC4 RBMX-209ENST00000565438 1292 ntTSL 5 BASIC12.07□□□□□ -0.48
PRICKLE4Q2TBC4 CNTROB-203ENST00000565740 2783 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
PRICKLE4Q2TBC4 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC12.07□□□□□ -0.48
PRICKLE4Q2TBC4 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
PRICKLE4Q2TBC4 ITGB2-AS1-204ENST00000609592 482 ntTSL 5 BASIC12.07□□□□□ -0.48
PRICKLE4Q2TBC4 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC12.07□□□□□ -0.48
PRICKLE4Q2TBC4 TOP3B-202ENST00000398793 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PRICKLE4Q2TBC4 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
PRICKLE4Q2TBC4 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
PRICKLE4Q2TBC4 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
PRICKLE4Q2TBC4 AC025538.1-201ENST00000510707 1486 ntBASIC12.07□□□□□ -0.48
PRICKLE4Q2TBC4 GPATCH2L-212ENST00000557263 1458 ntTSL 2 BASIC12.07□□□□□ -0.48
PRICKLE4Q2TBC4 AC116903.2-201ENST00000561674 1304 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
PRICKLE4Q2TBC4 TROVE2-206ENST00000400968 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
PRICKLE4Q2TBC4 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
PRICKLE4Q2TBC4 COX7A2L-202ENST00000378669 3056 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
PRICKLE4Q2TBC4 UBE2V1-207ENST00000420027 1956 ntTSL 5 BASIC12.07□□□□□ -0.48
PRICKLE4Q2TBC4 FP325330.2-201ENST00000624219 5630 ntBASIC12.07□□□□□ -0.48
PRICKLE4Q2TBC4 AL162615.1-201ENST00000429893 1653 ntBASIC12.06□□□□□ -0.48
PRICKLE4Q2TBC4 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PRICKLE4Q2TBC4 DFFB-201ENST00000338895 3105 ntTSL 2 BASIC12.06□□□□□ -0.48
PRICKLE4Q2TBC4 SUCLG2-203ENST00000492795 1512 ntTSL 2 BASIC12.06□□□□□ -0.48
PRICKLE4Q2TBC4 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
PRICKLE4Q2TBC4 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
PRICKLE4Q2TBC4 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PRICKLE4Q2TBC4 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
PRICKLE4Q2TBC4 PCDHB6-201ENST00000231136 3266 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
PRICKLE4Q2TBC4 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PRICKLE4Q2TBC4 ZNF44-202ENST00000355684 2119 ntAPPRIS P3 TSL 2 BASIC12.06□□□□□ -0.48
PRICKLE4Q2TBC4 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
PRICKLE4Q2TBC4 GSTK1-201ENST00000358406 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PRICKLE4Q2TBC4 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC12.06□□□□□ -0.48
PRICKLE4Q2TBC4 SAPCD1-AS1-202ENST00000419679 461 ntTSL 3 BASIC12.06□□□□□ -0.48
PRICKLE4Q2TBC4 AC098649.1-201ENST00000427258 569 ntTSL 4 BASIC12.06□□□□□ -0.48
PRICKLE4Q2TBC4 LINC00303-203ENST00000427799 1028 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
PRICKLE4Q2TBC4 AC099344.2-201ENST00000430897 1061 ntTSL 2 BASIC12.06□□□□□ -0.48
PRICKLE4Q2TBC4 AC105443.1-201ENST00000433754 712 ntBASIC12.06□□□□□ -0.48
PRICKLE4Q2TBC4 HNRNPA1P10-201ENST00000444945 962 ntBASIC12.06□□□□□ -0.48
PRICKLE4Q2TBC4 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC12.06□□□□□ -0.48
PRICKLE4Q2TBC4 GNGT2-204ENST00000511277 918 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
PRICKLE4Q2TBC4 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC12.06□□□□□ -0.48
PRICKLE4Q2TBC4 AC233724.9-201ENST00000511694 407 ntBASIC12.06□□□□□ -0.48
PRICKLE4Q2TBC4 AC008676.2-201ENST00000519499 741 ntTSL 3 BASIC12.06□□□□□ -0.48
PRICKLE4Q2TBC4 AL590235.1-201ENST00000564650 861 ntBASIC12.06□□□□□ -0.48
PRICKLE4Q2TBC4 AC009041.1-202ENST00000599946 987 ntTSL 5 BASIC12.06□□□□□ -0.48
PRICKLE4Q2TBC4 AC009061.2-202ENST00000602596 696 ntTSL 2 BASIC12.06□□□□□ -0.48
PRICKLE4Q2TBC4 AC006548.2-201ENST00000605217 529 ntBASIC12.06□□□□□ -0.48
PRICKLE4Q2TBC4 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC12.06□□□□□ -0.48
PRICKLE4Q2TBC4 AC007450.4-201ENST00000614709 524 ntBASIC12.06□□□□□ -0.48
PRICKLE4Q2TBC4 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PRICKLE4Q2TBC4 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PRICKLE4Q2TBC4 INTS14-203ENST00000431261 1980 ntTSL 2 BASIC12.06□□□□□ -0.48
PRICKLE4Q2TBC4 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
PRICKLE4Q2TBC4 HMBOX1-203ENST00000397358 4082 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PRICKLE4Q2TBC4 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
PRICKLE4Q2TBC4 PES1-205ENST00000405677 2708 ntTSL 2 BASIC12.06□□□□□ -0.48
PRICKLE4Q2TBC4 ELN-234ENST00000621115 3452 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
PRICKLE4Q2TBC4 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC12.06□□□□□ -0.48
PRICKLE4Q2TBC4 TEF-202ENST00000406644 4386 ntTSL 2 BASIC12.06□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms