Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 FBLN1-208ENST00000442170 2531 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
RIMBP3Q9UFD9 CFAP36-202ENST00000349456 2048 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
RIMBP3Q9UFD9 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RIMBP3Q9UFD9 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
RIMBP3Q9UFD9 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
RIMBP3Q9UFD9 EFR3B-205ENST00000405108 2432 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
RIMBP3Q9UFD9 KIR2DL1-202ENST00000336077 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RIMBP3Q9UFD9 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
RIMBP3Q9UFD9 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC19.26■□□□□ 0.67
RIMBP3Q9UFD9 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RIMBP3Q9UFD9 IQCJ-204ENST00000482126 1408 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RIMBP3Q9UFD9 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RIMBP3Q9UFD9 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RIMBP3Q9UFD9 LSS-211ENST00000522411 2523 ntTSL 2 BASIC19.26■□□□□ 0.67
RIMBP3Q9UFD9 HTR4-201ENST00000360693 3082 ntTSL 5 BASIC19.26■□□□□ 0.67
RIMBP3Q9UFD9 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC19.26■□□□□ 0.67
RIMBP3Q9UFD9 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
RIMBP3Q9UFD9 MED18-202ENST00000398997 1106 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
RIMBP3Q9UFD9 AL356277.1-201ENST00000401875 267 ntBASIC19.26■□□□□ 0.67
RIMBP3Q9UFD9 AC090912.2-204ENST00000583086 571 ntTSL 4 BASIC19.26■□□□□ 0.67
RIMBP3Q9UFD9 FAAHP1-206ENST00000635298 708 ntTSL 5 BASIC19.26■□□□□ 0.67
RIMBP3Q9UFD9 SPO11-201ENST00000345868 1666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RIMBP3Q9UFD9 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC19.26■□□□□ 0.67
RIMBP3Q9UFD9 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RIMBP3Q9UFD9 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC19.26■□□□□ 0.67
RIMBP3Q9UFD9 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RIMBP3Q9UFD9 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
RIMBP3Q9UFD9 TGFB2-OT1-201ENST00000625474 1371 ntBASIC19.26■□□□□ 0.67
RIMBP3Q9UFD9 NKIRAS2-205ENST00000393881 1598 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
RIMBP3Q9UFD9 METAP2-209ENST00000550777 1779 ntTSL 5 BASIC19.26■□□□□ 0.67
RIMBP3Q9UFD9 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
RIMBP3Q9UFD9 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RIMBP3Q9UFD9 AC133919.3-201ENST00000621407 1804 ntBASIC19.26■□□□□ 0.67
RIMBP3Q9UFD9 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
RIMBP3Q9UFD9 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC19.26■□□□□ 0.67
RIMBP3Q9UFD9 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RIMBP3Q9UFD9 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
RIMBP3Q9UFD9 OR7C1-201ENST00000248073 1066 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
RIMBP3Q9UFD9 A1CF-204ENST00000373997 2116 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RIMBP3Q9UFD9 DTX3L-202ENST00000383661 687 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RIMBP3Q9UFD9 RPSAP45-201ENST00000401872 874 ntBASIC19.25■□□□□ 0.67
RIMBP3Q9UFD9 GAPDHP2-201ENST00000432206 998 ntBASIC19.25■□□□□ 0.67
RIMBP3Q9UFD9 USP12-AS2-201ENST00000452222 279 ntTSL 3 BASIC19.25■□□□□ 0.67
RIMBP3Q9UFD9 RN7SL268P-201ENST00000491172 298 ntBASIC19.25■□□□□ 0.67
RIMBP3Q9UFD9 CCDC58-206ENST00000497726 438 ntTSL 5 BASIC19.25■□□□□ 0.67
RIMBP3Q9UFD9 EIF1AD-206ENST00000527249 889 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
RIMBP3Q9UFD9 RRP8-205ENST00000534343 726 ntTSL 2 BASIC19.25■□□□□ 0.67
RIMBP3Q9UFD9 AC005832.4-201ENST00000536588 818 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
RIMBP3Q9UFD9 LINC00969-229ENST00000596584 863 ntTSL 5 BASIC19.25■□□□□ 0.67
RIMBP3Q9UFD9 PPARGC1A-216ENST00000612355 936 ntTSL 5 BASIC19.25■□□□□ 0.67
RIMBP3Q9UFD9 AL158850.2-204ENST00000616537 1188 ntTSL 5 BASIC19.25■□□□□ 0.67
RIMBP3Q9UFD9 DPP6-216ENST00000619756 1109 ntTSL 5 BASIC19.25■□□□□ 0.67
RIMBP3Q9UFD9 AL358613.2-201ENST00000624651 567 ntTSL 4 BASIC19.25■□□□□ 0.67
RIMBP3Q9UFD9 LINC00969-286ENST00000627297 708 ntTSL 5 BASIC19.25■□□□□ 0.67
RIMBP3Q9UFD9 OPN1MW3-201ENST00000599405 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RIMBP3Q9UFD9 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RIMBP3Q9UFD9 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RIMBP3Q9UFD9 SRP72-205ENST00000510663 2473 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RIMBP3Q9UFD9 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RIMBP3Q9UFD9 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC19.25■□□□□ 0.67
RIMBP3Q9UFD9 AL606534.6-201ENST00000611420 1838 ntBASIC19.25■□□□□ 0.67
RIMBP3Q9UFD9 LRRC37A7P-202ENST00000585232 1394 ntBASIC19.25■□□□□ 0.67
RIMBP3Q9UFD9 FETUB-201ENST00000265029 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RIMBP3Q9UFD9 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RIMBP3Q9UFD9 CD33-201ENST00000262262 1444 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
RIMBP3Q9UFD9 AC008806.1-201ENST00000624962 2443 ntBASIC19.25■□□□□ 0.67
RIMBP3Q9UFD9 FTL-201ENST00000331825 878 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RIMBP3Q9UFD9 LHX9-202ENST00000367388 758 ntTSL 2 BASIC19.25■□□□□ 0.67
RIMBP3Q9UFD9 AL590640.1-201ENST00000425205 379 ntTSL 3 BASIC19.25■□□□□ 0.67
RIMBP3Q9UFD9 OR52T1P-201ENST00000435078 939 ntBASIC19.25■□□□□ 0.67
RIMBP3Q9UFD9 LINC01297-201ENST00000438574 519 ntTSL 3 BASIC19.25■□□□□ 0.67
RIMBP3Q9UFD9 AC067960.1-201ENST00000441053 812 ntTSL 3 BASIC19.25■□□□□ 0.67
RIMBP3Q9UFD9 OR7E136P-201ENST00000496207 1015 ntBASIC19.25■□□□□ 0.67
RIMBP3Q9UFD9 AC137794.1-201ENST00000509185 914 ntTSL 5 BASIC19.25■□□□□ 0.67
RIMBP3Q9UFD9 LINC01341-205ENST00000509202 503 ntTSL 4 BASIC19.25■□□□□ 0.67
RIMBP3Q9UFD9 MEG8_1.1-201ENST00000617245 97 ntBASIC19.25■□□□□ 0.67
RIMBP3Q9UFD9 AC022098.4-201ENST00000622575 352 ntBASIC19.25■□□□□ 0.67
RIMBP3Q9UFD9 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RIMBP3Q9UFD9 LINC01801-202ENST00000590963 2077 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RIMBP3Q9UFD9 GIMAP5-207ENST00000498181 1835 ntAPPRIS P1 TSL 4 BASIC19.25■□□□□ 0.67
RIMBP3Q9UFD9 RHBDL2-201ENST00000289248 2129 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
RIMBP3Q9UFD9 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
RIMBP3Q9UFD9 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC19.24■□□□□ 0.67
RIMBP3Q9UFD9 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
RIMBP3Q9UFD9 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RIMBP3Q9UFD9 SERPINA1-205ENST00000404814 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RIMBP3Q9UFD9 CLK4-215ENST00000611733 2182 ntTSL 5 BASIC19.24■□□□□ 0.67
RIMBP3Q9UFD9 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RIMBP3Q9UFD9 LINC01847-203ENST00000641163 1490 ntBASIC19.24■□□□□ 0.67
RIMBP3Q9UFD9 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
RIMBP3Q9UFD9 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RIMBP3Q9UFD9 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
RIMBP3Q9UFD9 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC19.24■□□□□ 0.67
RIMBP3Q9UFD9 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC19.24■□□□□ 0.67
RIMBP3Q9UFD9 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
RIMBP3Q9UFD9 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
RIMBP3Q9UFD9 ZNF583-201ENST00000291598 2538 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
RIMBP3Q9UFD9 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.24■□□□□ 0.67
RIMBP3Q9UFD9 RPL10P2-201ENST00000310599 670 ntBASIC19.24■□□□□ 0.67
RIMBP3Q9UFD9 TMED5-201ENST00000370280 750 ntTSL 2 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms