Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 RCBTB2-206ENST00000544904 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
POLR2J2Q9GZM3 DNM1L-220ENST00000549701 2487 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
POLR2J2Q9GZM3 AC007598.3-201ENST00000623077 1678 ntBASIC12.11□□□□□ -0.47
POLR2J2Q9GZM3 MSRA-202ENST00000382490 1460 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
POLR2J2Q9GZM3 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
POLR2J2Q9GZM3 AKAP13-202ENST00000394510 9128 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
POLR2J2Q9GZM3 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
POLR2J2Q9GZM3 NDUFB11-201ENST00000276062 948 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
POLR2J2Q9GZM3 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
POLR2J2Q9GZM3 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC12.11□□□□□ -0.47
POLR2J2Q9GZM3 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
POLR2J2Q9GZM3 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
POLR2J2Q9GZM3 SNORA50D-201ENST00000408059 134 ntBASIC12.11□□□□□ -0.47
POLR2J2Q9GZM3 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC12.11□□□□□ -0.47
POLR2J2Q9GZM3 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC12.11□□□□□ -0.47
POLR2J2Q9GZM3 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
POLR2J2Q9GZM3 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
POLR2J2Q9GZM3 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
POLR2J2Q9GZM3 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC12.11□□□□□ -0.47
POLR2J2Q9GZM3 CXXC1P1-202ENST00000489409 1212 ntBASIC12.11□□□□□ -0.47
POLR2J2Q9GZM3 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
POLR2J2Q9GZM3 AC019193.1-201ENST00000506678 823 ntBASIC12.11□□□□□ -0.47
POLR2J2Q9GZM3 LUCAT1-201ENST00000511918 828 ntTSL 3 BASIC12.11□□□□□ -0.47
POLR2J2Q9GZM3 FGFR3P5-201ENST00000564496 886 ntBASIC12.11□□□□□ -0.47
POLR2J2Q9GZM3 CES1P2-201ENST00000566467 1242 ntBASIC12.11□□□□□ -0.47
POLR2J2Q9GZM3 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC12.11□□□□□ -0.47
POLR2J2Q9GZM3 RN7SL357P-201ENST00000581065 298 ntBASIC12.11□□□□□ -0.47
POLR2J2Q9GZM3 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
POLR2J2Q9GZM3 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
POLR2J2Q9GZM3 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC12.11□□□□□ -0.47
POLR2J2Q9GZM3 SNORA50D-202ENST00000627561 132 ntBASIC12.11□□□□□ -0.47
POLR2J2Q9GZM3 TMEM164-204ENST00000372073 5567 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
POLR2J2Q9GZM3 EDARADD-204ENST00000637660 2803 ntTSL 5 BASIC12.11□□□□□ -0.47
POLR2J2Q9GZM3 SPCS2-209ENST00000610881 2711 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
POLR2J2Q9GZM3 SEPT9-201ENST00000329047 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
POLR2J2Q9GZM3 PID1-203ENST00000392055 2533 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
POLR2J2Q9GZM3 POU2F2-216ENST00000560558 3282 ntTSL 5 BASIC12.11□□□□□ -0.47
POLR2J2Q9GZM3 ZDHHC4-202ENST00000396706 1942 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
POLR2J2Q9GZM3 FRMD1-205ENST00000440994 2857 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
POLR2J2Q9GZM3 AKNA-202ENST00000307564 7380 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
POLR2J2Q9GZM3 CDH1-212ENST00000611625 4878 ntTSL 5 BASIC12.11□□□□□ -0.47
POLR2J2Q9GZM3 SLC35B4-201ENST00000378509 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
POLR2J2Q9GZM3 AOC2-202ENST00000452774 2572 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
POLR2J2Q9GZM3 SLX4-201ENST00000294008 7307 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
POLR2J2Q9GZM3 ALX1-201ENST00000316824 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
POLR2J2Q9GZM3 ZNF461-201ENST00000360357 2361 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
POLR2J2Q9GZM3 CRHR1-206ENST00000398285 2399 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
POLR2J2Q9GZM3 AC005696.4-201ENST00000614400 3147 ntBASIC12.11□□□□□ -0.47
POLR2J2Q9GZM3 NMNAT2-201ENST00000287713 5663 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
POLR2J2Q9GZM3 IYD-208ENST00000500320 2158 ntTSL 2 BASIC12.11□□□□□ -0.47
POLR2J2Q9GZM3 PRAMENP-201ENST00000337471 3038 ntTSL 2 BASIC12.11□□□□□ -0.47
POLR2J2Q9GZM3 RALGAPB-201ENST00000262879 8663 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
POLR2J2Q9GZM3 EDEM2-201ENST00000374491 1756 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
POLR2J2Q9GZM3 SNRNP48-201ENST00000342415 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
POLR2J2Q9GZM3 PCDHGB8P-202ENST00000507007 2873 ntBASIC12.1□□□□□ -0.47
POLR2J2Q9GZM3 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
POLR2J2Q9GZM3 HSPA4-204ENST00000615899 2204 ntTSL 5 BASIC12.1□□□□□ -0.47
POLR2J2Q9GZM3 CACUL1-201ENST00000369151 11311 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
POLR2J2Q9GZM3 AKAP8-201ENST00000269701 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
POLR2J2Q9GZM3 MTRF1L-203ENST00000367233 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
POLR2J2Q9GZM3 IQCB1-202ENST00000349820 1919 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
POLR2J2Q9GZM3 ARAF-203ENST00000377045 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
POLR2J2Q9GZM3 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC12.1□□□□□ -0.47
POLR2J2Q9GZM3 ZFP37-203ENST00000555206 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
POLR2J2Q9GZM3 AC034205.3-201ENST00000603595 1376 ntBASIC12.1□□□□□ -0.47
POLR2J2Q9GZM3 SMIM27-203ENST00000451672 2382 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
POLR2J2Q9GZM3 LIG1-201ENST00000263274 3384 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
POLR2J2Q9GZM3 SPART-203ENST00000451493 4944 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
POLR2J2Q9GZM3 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC12.1□□□□□ -0.47
POLR2J2Q9GZM3 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC12.1□□□□□ -0.47
POLR2J2Q9GZM3 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
POLR2J2Q9GZM3 MRPL55-207ENST00000366733 834 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
POLR2J2Q9GZM3 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
POLR2J2Q9GZM3 FAM126A-201ENST00000409763 616 ntTSL 2 BASIC12.1□□□□□ -0.47
POLR2J2Q9GZM3 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC12.1□□□□□ -0.47
POLR2J2Q9GZM3 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
POLR2J2Q9GZM3 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC12.1□□□□□ -0.47
POLR2J2Q9GZM3 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC12.1□□□□□ -0.47
POLR2J2Q9GZM3 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
POLR2J2Q9GZM3 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC12.1□□□□□ -0.47
POLR2J2Q9GZM3 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC12.1□□□□□ -0.47
POLR2J2Q9GZM3 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC12.1□□□□□ -0.47
POLR2J2Q9GZM3 AP000911.2-201ENST00000534330 502 ntBASIC12.1□□□□□ -0.47
POLR2J2Q9GZM3 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
POLR2J2Q9GZM3 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC12.1□□□□□ -0.47
POLR2J2Q9GZM3 AIPL1-210ENST00000576307 1077 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
POLR2J2Q9GZM3 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC12.1□□□□□ -0.47
POLR2J2Q9GZM3 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC12.1□□□□□ -0.47
POLR2J2Q9GZM3 MIR6770-3-201ENST00000616362 60 ntBASIC12.1□□□□□ -0.47
POLR2J2Q9GZM3 MIR6787-201ENST00000616675 61 ntBASIC12.1□□□□□ -0.47
POLR2J2Q9GZM3 MIR6770-2-201ENST00000618304 60 ntBASIC12.1□□□□□ -0.47
POLR2J2Q9GZM3 MIR6770-1-201ENST00000622248 60 ntBASIC12.1□□□□□ -0.47
POLR2J2Q9GZM3 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
POLR2J2Q9GZM3 LINC01987-201ENST00000593118 2281 ntTSL 2 BASIC12.1□□□□□ -0.47
POLR2J2Q9GZM3 PUM2-203ENST00000361078 6251 ntTSL 2 BASIC12.1□□□□□ -0.47
POLR2J2Q9GZM3 CFAP157-202ENST00000373295 1721 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
POLR2J2Q9GZM3 GBP1P1-201ENST00000394662 1740 ntBASIC12.1□□□□□ -0.47
POLR2J2Q9GZM3 C10orf90-201ENST00000284694 3076 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
POLR2J2Q9GZM3 CACNG3-201ENST00000005284 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
POLR2J2Q9GZM3 ENO2-209ENST00000538763 1646 ntTSL 5 BASIC12.1□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms