Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 DLX4-206ENST00000611342 1662 ntBASIC11.93□□□□□ -0.5
P04436 VDR-202ENST00000395324 4762 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
P04436 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
P04436 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
P04436 ACR-201ENST00000216139 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
P04436 FAM71E2-201ENST00000424985 3191 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
P04436 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
P04436 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC11.93□□□□□ -0.5
P04436 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
P04436 FAM133B-204ENST00000445716 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
P04436 RGS6-203ENST00000402788 5400 ntTSL 2 BASIC11.93□□□□□ -0.5
P04436 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
P04436 GJB5-201ENST00000338513 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
P04436 COL19A1-205ENST00000620364 6233 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
P04436 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
P04436 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
P04436 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
P04436 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
P04436 CELSR3-201ENST00000164024 11956 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
P04436 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
P04436 ZFAT-209ENST00000520727 4686 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
P04436 VPS13A-204ENST00000376634 10269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
P04436 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
P04436 KLHL7-202ENST00000339077 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
P04436 COX18-201ENST00000295890 6846 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
P04436 BX537318.2-201ENST00000624893 4162 ntBASIC11.92□□□□□ -0.5
P04436 EFHD1-204ENST00000410095 1538 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
P04436 ZNF239-205ENST00000535642 1904 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
P04436 SAP18-208ENST00000621421 2300 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
P04436 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC11.92□□□□□ -0.5
P04436 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
P04436 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC11.92□□□□□ -0.5
P04436 ATL2-201ENST00000378954 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
P04436 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC11.92□□□□□ -0.5
P04436 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
P04436 GMPR2-201ENST00000348719 1684 ntTSL 5 BASIC11.92□□□□□ -0.5
P04436 XYLB-203ENST00000427323 1666 ntTSL 2 BASIC11.92□□□□□ -0.5
P04436 PPP1R32-203ENST00000432063 1472 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
P04436 KCNAB2-206ENST00000378097 4201 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
P04436 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC11.92□□□□□ -0.5
P04436 HNRNPA1P58-201ENST00000403629 610 ntBASIC11.92□□□□□ -0.5
P04436 FDPSP7-201ENST00000429043 1054 ntBASIC11.92□□□□□ -0.5
P04436 AL118511.1-201ENST00000439341 794 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
P04436 TULP3P1-202ENST00000453253 1291 ntBASIC11.92□□□□□ -0.5
P04436 LAMTOR5-203ENST00000474861 1154 ntTSL 2 BASIC11.92□□□□□ -0.5
P04436 CST7-201ENST00000480798 930 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
P04436 AC008494.1-201ENST00000497612 796 ntBASIC11.92□□□□□ -0.5
P04436 SNHG4-204ENST00000507197 865 ntTSL 2 BASIC11.92□□□□□ -0.5
P04436 DDX11L8-201ENST00000535849 366 ntBASIC11.92□□□□□ -0.5
P04436 AL583722.3-201ENST00000553433 503 ntTSL 4 BASIC11.92□□□□□ -0.5
P04436 DTWD1-205ENST00000558653 1131 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
P04436 AC018846.1-201ENST00000568231 183 ntBASIC11.92□□□□□ -0.5
P04436 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC11.92□□□□□ -0.5
P04436 AC005786.2-201ENST00000592368 369 ntTSL 3 BASIC11.92□□□□□ -0.5
P04436 HAMP-203ENST00000598398 652 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
P04436 FXYD3-211ENST00000604804 564 ntTSL 4 BASIC11.92□□□□□ -0.5
P04436 ZNF674-AS1-202ENST00000609887 672 ntTSL 5 BASIC11.92□□□□□ -0.5
P04436 AC009041.4-201ENST00000620075 638 ntBASIC11.92□□□□□ -0.5
P04436 AC245369.7-201ENST00000631386 350 ntBASIC11.92□□□□□ -0.5
P04436 OR1I1-202ENST00000641398 5984 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
P04436 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
P04436 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
P04436 ZNF701-204ENST00000540331 5538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
P04436 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
P04436 PLXNA4-203ENST00000378539 2004 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
P04436 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
P04436 PPP1R10-201ENST00000376511 4525 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
P04436 AC009093.9-201ENST00000566038 1611 ntBASIC11.92□□□□□ -0.5
P04436 CDK7-201ENST00000256443 1439 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
P04436 CAMK2B-202ENST00000346990 1448 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
P04436 MMP19-202ENST00000409200 1431 ntTSL 2 BASIC11.92□□□□□ -0.5
P04436 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
P04436 PPT1-213ENST00000641319 2388 ntBASIC11.92□□□□□ -0.5
P04436 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
P04436 TUBAL3-201ENST00000380419 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
P04436 SEPT10-208ENST00000437928 1782 ntTSL 5 BASIC11.92□□□□□ -0.5
P04436 SFPQP1-201ENST00000446621 1786 ntBASIC11.92□□□□□ -0.5
P04436 SYMPK-201ENST00000245934 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
P04436 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
P04436 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
P04436 YAP1P1-201ENST00000401504 1393 ntBASIC11.92□□□□□ -0.5
P04436 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC11.92□□□□□ -0.5
P04436 AC090403.1-201ENST00000584546 1352 ntTSL 2 BASIC11.92□□□□□ -0.5
P04436 ABCA2-223ENST00000614293 8146 ntTSL 5 BASIC11.92□□□□□ -0.5
P04436 STAT3-202ENST00000389272 2615 ntTSL 2 BASIC11.91□□□□□ -0.5
P04436 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
P04436 PPP1R8-201ENST00000236412 2414 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
P04436 COBLL1-202ENST00000375458 9367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
P04436 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
P04436 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
P04436 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
P04436 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC11.91□□□□□ -0.5
P04436 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
P04436 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
P04436 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC11.91□□□□□ -0.5
P04436 CXorf38-203ENST00000378426 4895 ntTSL 2 BASIC11.91□□□□□ -0.5
P04436 OR2W3-201ENST00000360358 945 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
P04436 RBP4-203ENST00000371469 814 ntTSL 5 BASIC11.91□□□□□ -0.5
P04436 CMTM5-204ENST00000382809 378 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
P04436 FAM178B-201ENST00000393526 1004 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 145.5 ms