Protein–RNA interactions for Protein: R4GMX3

COMMD3-BMI1, COMMD3-BMI1 readthrough, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1R4GMX3 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
COMMD3-BMI1R4GMX3 MIR6765-201ENST00000614092 87 ntBASIC20.56■□□□□ 0.88
COMMD3-BMI1R4GMX3 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
COMMD3-BMI1R4GMX3 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
COMMD3-BMI1R4GMX3 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
COMMD3-BMI1R4GMX3 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
COMMD3-BMI1R4GMX3 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.55■□□□□ 0.88
COMMD3-BMI1R4GMX3 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.55■□□□□ 0.88
COMMD3-BMI1R4GMX3 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COMMD3-BMI1R4GMX3 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.55■□□□□ 0.88
COMMD3-BMI1R4GMX3 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.55■□□□□ 0.88
COMMD3-BMI1R4GMX3 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
COMMD3-BMI1R4GMX3 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.55■□□□□ 0.88
COMMD3-BMI1R4GMX3 AC087393.1-201ENST00000582896 145 ntBASIC20.55■□□□□ 0.88
COMMD3-BMI1R4GMX3 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.55■□□□□ 0.88
COMMD3-BMI1R4GMX3 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COMMD3-BMI1R4GMX3 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COMMD3-BMI1R4GMX3 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COMMD3-BMI1R4GMX3 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COMMD3-BMI1R4GMX3 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COMMD3-BMI1R4GMX3 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COMMD3-BMI1R4GMX3 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
COMMD3-BMI1R4GMX3 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COMMD3-BMI1R4GMX3 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.54■□□□□ 0.88
COMMD3-BMI1R4GMX3 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COMMD3-BMI1R4GMX3 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.54■□□□□ 0.88
COMMD3-BMI1R4GMX3 HSD17B1P1-201ENST00000590052 955 ntBASIC20.54■□□□□ 0.88
COMMD3-BMI1R4GMX3 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COMMD3-BMI1R4GMX3 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.54■□□□□ 0.88
COMMD3-BMI1R4GMX3 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.54■□□□□ 0.88
COMMD3-BMI1R4GMX3 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COMMD3-BMI1R4GMX3 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
COMMD3-BMI1R4GMX3 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
COMMD3-BMI1R4GMX3 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
COMMD3-BMI1R4GMX3 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
COMMD3-BMI1R4GMX3 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
COMMD3-BMI1R4GMX3 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
COMMD3-BMI1R4GMX3 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
COMMD3-BMI1R4GMX3 AL157384.1-201ENST00000445995 2473 ntBASIC20.53■□□□□ 0.88
COMMD3-BMI1R4GMX3 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COMMD3-BMI1R4GMX3 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
COMMD3-BMI1R4GMX3 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COMMD3-BMI1R4GMX3 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
COMMD3-BMI1R4GMX3 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.52■□□□□ 0.88
COMMD3-BMI1R4GMX3 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.52■□□□□ 0.88
COMMD3-BMI1R4GMX3 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
COMMD3-BMI1R4GMX3 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.52■□□□□ 0.88
COMMD3-BMI1R4GMX3 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.52■□□□□ 0.88
COMMD3-BMI1R4GMX3 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
COMMD3-BMI1R4GMX3 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
COMMD3-BMI1R4GMX3 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
COMMD3-BMI1R4GMX3 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.87
COMMD3-BMI1R4GMX3 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
COMMD3-BMI1R4GMX3 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
COMMD3-BMI1R4GMX3 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
COMMD3-BMI1R4GMX3 U85056.1-201ENST00000616429 682 ntBASIC20.51■□□□□ 0.87
COMMD3-BMI1R4GMX3 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.51■□□□□ 0.87
COMMD3-BMI1R4GMX3 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
COMMD3-BMI1R4GMX3 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
COMMD3-BMI1R4GMX3 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.51■□□□□ 0.87
COMMD3-BMI1R4GMX3 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
COMMD3-BMI1R4GMX3 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
COMMD3-BMI1R4GMX3 AC090877.2-201ENST00000558441 1738 ntBASIC20.5■□□□□ 0.87
COMMD3-BMI1R4GMX3 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.5■□□□□ 0.87
COMMD3-BMI1R4GMX3 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
COMMD3-BMI1R4GMX3 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COMMD3-BMI1R4GMX3 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
COMMD3-BMI1R4GMX3 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COMMD3-BMI1R4GMX3 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COMMD3-BMI1R4GMX3 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
COMMD3-BMI1R4GMX3 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.5■□□□□ 0.87
COMMD3-BMI1R4GMX3 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COMMD3-BMI1R4GMX3 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
COMMD3-BMI1R4GMX3 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
COMMD3-BMI1R4GMX3 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COMMD3-BMI1R4GMX3 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
COMMD3-BMI1R4GMX3 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
COMMD3-BMI1R4GMX3 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
COMMD3-BMI1R4GMX3 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
COMMD3-BMI1R4GMX3 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
COMMD3-BMI1R4GMX3 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
COMMD3-BMI1R4GMX3 AL592295.1-201ENST00000400984 884 ntBASIC20.49■□□□□ 0.87
COMMD3-BMI1R4GMX3 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COMMD3-BMI1R4GMX3 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
COMMD3-BMI1R4GMX3 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
COMMD3-BMI1R4GMX3 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.49■□□□□ 0.87
COMMD3-BMI1R4GMX3 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.49■□□□□ 0.87
COMMD3-BMI1R4GMX3 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COMMD3-BMI1R4GMX3 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
COMMD3-BMI1R4GMX3 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COMMD3-BMI1R4GMX3 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.48■□□□□ 0.87
COMMD3-BMI1R4GMX3 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COMMD3-BMI1R4GMX3 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
COMMD3-BMI1R4GMX3 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COMMD3-BMI1R4GMX3 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
COMMD3-BMI1R4GMX3 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
COMMD3-BMI1R4GMX3 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
COMMD3-BMI1R4GMX3 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.47■□□□□ 0.87
COMMD3-BMI1R4GMX3 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COMMD3-BMI1R4GMX3 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms