Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGA6Q9Y5G7 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
PCDHGA6Q9Y5G7 AC126544.1-201ENST00000580842 1059 ntBASIC21.11■□□□□ 0.97
PCDHGA6Q9Y5G7 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC21.11■□□□□ 0.97
PCDHGA6Q9Y5G7 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.11■□□□□ 0.97
PCDHGA6Q9Y5G7 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGA6Q9Y5G7 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGA6Q9Y5G7 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
PCDHGA6Q9Y5G7 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGA6Q9Y5G7 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGA6Q9Y5G7 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHGA6Q9Y5G7 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
PCDHGA6Q9Y5G7 EP400NL-214ENST00000641289 2402 ntBASIC21.1■□□□□ 0.97
PCDHGA6Q9Y5G7 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHGA6Q9Y5G7 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
PCDHGA6Q9Y5G7 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHGA6Q9Y5G7 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.1■□□□□ 0.97
PCDHGA6Q9Y5G7 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHGA6Q9Y5G7 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHGA6Q9Y5G7 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHGA6Q9Y5G7 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.1■□□□□ 0.97
PCDHGA6Q9Y5G7 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.1■□□□□ 0.97
PCDHGA6Q9Y5G7 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.1■□□□□ 0.97
PCDHGA6Q9Y5G7 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.1■□□□□ 0.97
PCDHGA6Q9Y5G7 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHGA6Q9Y5G7 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
PCDHGA6Q9Y5G7 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGA6Q9Y5G7 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGA6Q9Y5G7 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGA6Q9Y5G7 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGA6Q9Y5G7 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
PCDHGA6Q9Y5G7 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGA6Q9Y5G7 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGA6Q9Y5G7 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGA6Q9Y5G7 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGA6Q9Y5G7 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
PCDHGA6Q9Y5G7 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHGA6Q9Y5G7 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.09■□□□□ 0.97
PCDHGA6Q9Y5G7 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHGA6Q9Y5G7 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHGA6Q9Y5G7 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHGA6Q9Y5G7 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHGA6Q9Y5G7 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHGA6Q9Y5G7 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.08■□□□□ 0.97
PCDHGA6Q9Y5G7 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHGA6Q9Y5G7 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.08■□□□□ 0.97
PCDHGA6Q9Y5G7 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.08■□□□□ 0.97
PCDHGA6Q9Y5G7 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
PCDHGA6Q9Y5G7 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
PCDHGA6Q9Y5G7 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.08■□□□□ 0.96
PCDHGA6Q9Y5G7 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PCDHGA6Q9Y5G7 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
PCDHGA6Q9Y5G7 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHGA6Q9Y5G7 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHGA6Q9Y5G7 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
PCDHGA6Q9Y5G7 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
PCDHGA6Q9Y5G7 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHGA6Q9Y5G7 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHGA6Q9Y5G7 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHGA6Q9Y5G7 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHGA6Q9Y5G7 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHGA6Q9Y5G7 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.07■□□□□ 0.96
PCDHGA6Q9Y5G7 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHGA6Q9Y5G7 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHGA6Q9Y5G7 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHGA6Q9Y5G7 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHGA6Q9Y5G7 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.06■□□□□ 0.96
PCDHGA6Q9Y5G7 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
PCDHGA6Q9Y5G7 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.06■□□□□ 0.96
PCDHGA6Q9Y5G7 YBX1P1-201ENST00000445822 960 ntBASIC21.06■□□□□ 0.96
PCDHGA6Q9Y5G7 SLC47A1P1-202ENST00000449666 945 ntBASIC21.06■□□□□ 0.96
PCDHGA6Q9Y5G7 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC21.06■□□□□ 0.96
PCDHGA6Q9Y5G7 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHGA6Q9Y5G7 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHGA6Q9Y5G7 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.06■□□□□ 0.96
PCDHGA6Q9Y5G7 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHGA6Q9Y5G7 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHGA6Q9Y5G7 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDHGA6Q9Y5G7 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHGA6Q9Y5G7 TSPY26P-201ENST00000476365 1326 ntBASIC21.05■□□□□ 0.96
PCDHGA6Q9Y5G7 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHGA6Q9Y5G7 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
PCDHGA6Q9Y5G7 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHGA6Q9Y5G7 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.05■□□□□ 0.96
PCDHGA6Q9Y5G7 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
PCDHGA6Q9Y5G7 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
PCDHGA6Q9Y5G7 AC034268.1-201ENST00000441047 882 ntBASIC21.05■□□□□ 0.96
PCDHGA6Q9Y5G7 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.05■□□□□ 0.96
PCDHGA6Q9Y5G7 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
PCDHGA6Q9Y5G7 LINC00565-201ENST00000562710 2331 ntBASIC21.05■□□□□ 0.96
PCDHGA6Q9Y5G7 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.05■□□□□ 0.96
PCDHGA6Q9Y5G7 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDHGA6Q9Y5G7 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
PCDHGA6Q9Y5G7 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHGA6Q9Y5G7 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHGA6Q9Y5G7 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHGA6Q9Y5G7 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDHGA6Q9Y5G7 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
PCDHGA6Q9Y5G7 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.04■□□□□ 0.96
PCDHGA6Q9Y5G7 IGHV3-19-201ENST00000521488 291 ntBASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms