Protein–RNA interactions for Protein: Q9Y570

PPME1, Protein phosphatase methylesterase 1, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1Q9Y570 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
PPME1Q9Y570 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
PPME1Q9Y570 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
PPME1Q9Y570 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC24.33■■□□□ 1.49
PPME1Q9Y570 USP45-205ENST00000472914 1617 ntTSL 5 BASIC24.33■■□□□ 1.49
PPME1Q9Y570 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
PPME1Q9Y570 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC24.33■■□□□ 1.49
PPME1Q9Y570 NME4-202ENST00000382940 766 ntTSL 3 BASIC24.33■■□□□ 1.49
PPME1Q9Y570 AC027612.3-201ENST00000413684 1047 ntBASIC24.33■■□□□ 1.49
PPME1Q9Y570 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC24.33■■□□□ 1.49
PPME1Q9Y570 AC097381.1-201ENST00000429019 1296 ntBASIC24.33■■□□□ 1.49
PPME1Q9Y570 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC24.33■■□□□ 1.49
PPME1Q9Y570 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
PPME1Q9Y570 AC012414.1-201ENST00000556676 535 ntBASIC24.33■■□□□ 1.49
PPME1Q9Y570 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC24.33■■□□□ 1.49
PPME1Q9Y570 NME4-211ENST00000620944 1193 ntTSL 2 BASIC24.33■■□□□ 1.49
PPME1Q9Y570 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
PPME1Q9Y570 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
PPME1Q9Y570 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC24.32■■□□□ 1.48
PPME1Q9Y570 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC24.32■■□□□ 1.48
PPME1Q9Y570 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
PPME1Q9Y570 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PPME1Q9Y570 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
PPME1Q9Y570 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC24.32■■□□□ 1.48
PPME1Q9Y570 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC24.32■■□□□ 1.48
PPME1Q9Y570 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
PPME1Q9Y570 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC24.31■■□□□ 1.48
PPME1Q9Y570 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC24.31■■□□□ 1.48
PPME1Q9Y570 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC24.31■■□□□ 1.48
PPME1Q9Y570 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
PPME1Q9Y570 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PPME1Q9Y570 RARA-203ENST00000394086 2008 ntTSL 2 BASIC24.3■■□□□ 1.48
PPME1Q9Y570 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PPME1Q9Y570 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PPME1Q9Y570 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
PPME1Q9Y570 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC24.3■■□□□ 1.48
PPME1Q9Y570 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC24.3■■□□□ 1.48
PPME1Q9Y570 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC24.3■■□□□ 1.48
PPME1Q9Y570 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
PPME1Q9Y570 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
PPME1Q9Y570 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
PPME1Q9Y570 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PPME1Q9Y570 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC24.29■■□□□ 1.48
PPME1Q9Y570 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PPME1Q9Y570 OXCT2P1-201ENST00000447263 1535 ntBASIC24.29■■□□□ 1.48
PPME1Q9Y570 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC24.29■■□□□ 1.48
PPME1Q9Y570 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
PPME1Q9Y570 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC24.29■■□□□ 1.48
PPME1Q9Y570 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC24.29■■□□□ 1.48
PPME1Q9Y570 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
PPME1Q9Y570 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PPME1Q9Y570 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PPME1Q9Y570 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC24.28■■□□□ 1.48
PPME1Q9Y570 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
PPME1Q9Y570 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
PPME1Q9Y570 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC24.28■■□□□ 1.48
PPME1Q9Y570 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PPME1Q9Y570 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PPME1Q9Y570 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PPME1Q9Y570 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC24.28■■□□□ 1.48
PPME1Q9Y570 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PPME1Q9Y570 MFF-208ENST00000409616 1247 ntTSL 5 BASIC24.28■■□□□ 1.48
PPME1Q9Y570 AC123595.1-201ENST00000440769 1046 ntBASIC24.28■■□□□ 1.48
PPME1Q9Y570 YBX1P1-201ENST00000445822 960 ntBASIC24.28■■□□□ 1.48
PPME1Q9Y570 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
PPME1Q9Y570 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC24.28■■□□□ 1.48
PPME1Q9Y570 AC105233.4-201ENST00000642045 216 ntBASIC24.28■■□□□ 1.48
PPME1Q9Y570 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PPME1Q9Y570 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC24.28■■□□□ 1.48
PPME1Q9Y570 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
PPME1Q9Y570 MPST-204ENST00000404393 1329 ntTSL 5 BASIC24.28■■□□□ 1.48
PPME1Q9Y570 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
PPME1Q9Y570 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC24.28■■□□□ 1.48
PPME1Q9Y570 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC24.27■■□□□ 1.48
PPME1Q9Y570 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PPME1Q9Y570 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
PPME1Q9Y570 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
PPME1Q9Y570 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PPME1Q9Y570 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
PPME1Q9Y570 SP2-202ENST00000613139 908 ntTSL 5 BASIC24.27■■□□□ 1.48
PPME1Q9Y570 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
PPME1Q9Y570 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC24.26■■□□□ 1.47
PPME1Q9Y570 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
PPME1Q9Y570 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PPME1Q9Y570 MIR5787-201ENST00000611784 55 ntBASIC24.26■■□□□ 1.47
PPME1Q9Y570 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PPME1Q9Y570 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PPME1Q9Y570 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PPME1Q9Y570 GCA-201ENST00000233612 1694 ntTSL 2 BASIC24.25■■□□□ 1.47
PPME1Q9Y570 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
PPME1Q9Y570 THRA-202ENST00000394121 2260 ntTSL 2 BASIC24.25■■□□□ 1.47
PPME1Q9Y570 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC24.25■■□□□ 1.47
PPME1Q9Y570 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
PPME1Q9Y570 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC24.25■■□□□ 1.47
PPME1Q9Y570 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC24.25■■□□□ 1.47
PPME1Q9Y570 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC24.24■■□□□ 1.47
PPME1Q9Y570 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PPME1Q9Y570 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.47
PPME1Q9Y570 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC24.24■■□□□ 1.47
PPME1Q9Y570 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms