Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC33.16■■■□□ 2.9
SHANK2Q9UPX8 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC33.16■■■□□ 2.9
SHANK2Q9UPX8 PREB-202ENST00000406567 1910 ntTSL 5 BASIC33.16■■■□□ 2.9
SHANK2Q9UPX8 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC33.16■■■□□ 2.9
SHANK2Q9UPX8 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
SHANK2Q9UPX8 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
SHANK2Q9UPX8 AC006015.1-201ENST00000429970 570 ntBASIC33.16■■■□□ 2.9
SHANK2Q9UPX8 SMUG1P1-201ENST00000590640 811 ntBASIC33.16■■■□□ 2.9
SHANK2Q9UPX8 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC33.15■■■□□ 2.9
SHANK2Q9UPX8 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
SHANK2Q9UPX8 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC33.15■■■□□ 2.9
SHANK2Q9UPX8 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC33.15■■■□□ 2.9
SHANK2Q9UPX8 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC33.15■■■□□ 2.9
SHANK2Q9UPX8 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC33.15■■■□□ 2.9
SHANK2Q9UPX8 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC33.15■■■□□ 2.9
SHANK2Q9UPX8 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
SHANK2Q9UPX8 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC33.14■■■□□ 2.9
SHANK2Q9UPX8 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC33.14■■■□□ 2.9
SHANK2Q9UPX8 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC33.14■■■□□ 2.9
SHANK2Q9UPX8 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC33.14■■■□□ 2.9
SHANK2Q9UPX8 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC33.14■■■□□ 2.9
SHANK2Q9UPX8 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
SHANK2Q9UPX8 AC010141.3-201ENST00000456659 717 ntBASIC33.13■■■□□ 2.89
SHANK2Q9UPX8 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC33.13■■■□□ 2.89
SHANK2Q9UPX8 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC33.12■■■□□ 2.89
SHANK2Q9UPX8 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC33.12■■■□□ 2.89
SHANK2Q9UPX8 AC087239.1-201ENST00000622671 572 ntBASIC33.12■■■□□ 2.89
SHANK2Q9UPX8 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
SHANK2Q9UPX8 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
SHANK2Q9UPX8 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC33.12■■■□□ 2.89
SHANK2Q9UPX8 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
SHANK2Q9UPX8 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC33.11■■■□□ 2.89
SHANK2Q9UPX8 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
SHANK2Q9UPX8 ABHD17AP1-201ENST00000358206 933 ntBASIC33.11■■■□□ 2.89
SHANK2Q9UPX8 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC33.11■■■□□ 2.89
SHANK2Q9UPX8 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
SHANK2Q9UPX8 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC33.1■■■□□ 2.89
SHANK2Q9UPX8 ABCB10P4-201ENST00000566803 2184 ntBASIC33.1■■■□□ 2.89
SHANK2Q9UPX8 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC33.1■■■□□ 2.89
SHANK2Q9UPX8 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
SHANK2Q9UPX8 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC33.1■■■□□ 2.89
SHANK2Q9UPX8 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
SHANK2Q9UPX8 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
SHANK2Q9UPX8 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC33.09■■■□□ 2.89
SHANK2Q9UPX8 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC33.09■■■□□ 2.89
SHANK2Q9UPX8 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
SHANK2Q9UPX8 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC33.09■■■□□ 2.89
SHANK2Q9UPX8 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC33.09■■■□□ 2.89
SHANK2Q9UPX8 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC33.09■■■□□ 2.89
SHANK2Q9UPX8 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
SHANK2Q9UPX8 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC33.08■■■□□ 2.89
SHANK2Q9UPX8 RAP2CP1-201ENST00000605103 478 ntBASIC33.08■■■□□ 2.89
SHANK2Q9UPX8 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
SHANK2Q9UPX8 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC33.08■■■□□ 2.89
SHANK2Q9UPX8 BX005040.4-201ENST00000637145 1518 ntBASIC33.08■■■□□ 2.89
SHANK2Q9UPX8 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC33.08■■■□□ 2.89
SHANK2Q9UPX8 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC33.07■■■□□ 2.88
SHANK2Q9UPX8 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC33.07■■■□□ 2.88
SHANK2Q9UPX8 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC33.07■■■□□ 2.88
SHANK2Q9UPX8 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC33.07■■■□□ 2.88
SHANK2Q9UPX8 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
SHANK2Q9UPX8 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC33.07■■■□□ 2.88
SHANK2Q9UPX8 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC33.06■■■□□ 2.88
SHANK2Q9UPX8 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC33.06■■■□□ 2.88
SHANK2Q9UPX8 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC33.06■■■□□ 2.88
SHANK2Q9UPX8 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC33.06■■■□□ 2.88
SHANK2Q9UPX8 GXYLT1P2-201ENST00000433312 1230 ntBASIC33.06■■■□□ 2.88
SHANK2Q9UPX8 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC33.06■■■□□ 2.88
SHANK2Q9UPX8 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC33.06■■■□□ 2.88
SHANK2Q9UPX8 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC33.06■■■□□ 2.88
SHANK2Q9UPX8 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
SHANK2Q9UPX8 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC33.06■■■□□ 2.88
SHANK2Q9UPX8 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC33.06■■■□□ 2.88
SHANK2Q9UPX8 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
SHANK2Q9UPX8 GALNS-213ENST00000569433 723 ntTSL 3 BASIC33.05■■■□□ 2.88
SHANK2Q9UPX8 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
SHANK2Q9UPX8 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
SHANK2Q9UPX8 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
SHANK2Q9UPX8 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC33.05■■■□□ 2.88
SHANK2Q9UPX8 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
SHANK2Q9UPX8 AC004854.2-201ENST00000608450 1441 ntBASIC33.05■■■□□ 2.88
SHANK2Q9UPX8 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC33.05■■■□□ 2.88
SHANK2Q9UPX8 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
SHANK2Q9UPX8 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC33.04■■■□□ 2.88
SHANK2Q9UPX8 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC33.04■■■□□ 2.88
SHANK2Q9UPX8 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
SHANK2Q9UPX8 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC33.04■■■□□ 2.88
SHANK2Q9UPX8 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
SHANK2Q9UPX8 AP004607.4-201ENST00000530158 1459 ntBASIC33.03■■■□□ 2.88
SHANK2Q9UPX8 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC33.03■■■□□ 2.88
SHANK2Q9UPX8 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC33.03■■■□□ 2.88
SHANK2Q9UPX8 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC33.03■■■□□ 2.88
SHANK2Q9UPX8 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
SHANK2Q9UPX8 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
SHANK2Q9UPX8 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC33.02■■■□□ 2.88
SHANK2Q9UPX8 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
SHANK2Q9UPX8 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC33.02■■■□□ 2.88
SHANK2Q9UPX8 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
SHANK2Q9UPX8 HSCB-202ENST00000398941 955 ntTSL 2 BASIC33.02■■■□□ 2.88
SHANK2Q9UPX8 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC33.02■■■□□ 2.88
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms