Protein–RNA interactions for Protein: Q9ULS5

TMCC3, Transmembrane and coiled-coil domain protein 3, humanhuman

Predictions only

Length 477 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMCC3Q9ULS5 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.33■□□□□ 0.85
TMCC3Q9ULS5 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.33■□□□□ 0.85
TMCC3Q9ULS5 AC010980.1-201ENST00000587192 1142 ntBASIC20.33■□□□□ 0.85
TMCC3Q9ULS5 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
TMCC3Q9ULS5 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
TMCC3Q9ULS5 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.33■□□□□ 0.84
TMCC3Q9ULS5 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TMCC3Q9ULS5 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TMCC3Q9ULS5 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TMCC3Q9ULS5 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TMCC3Q9ULS5 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TMCC3Q9ULS5 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.32■□□□□ 0.84
TMCC3Q9ULS5 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
TMCC3Q9ULS5 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
TMCC3Q9ULS5 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TMCC3Q9ULS5 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TMCC3Q9ULS5 AC087742.1-201ENST00000575880 1738 ntBASIC20.31■□□□□ 0.84
TMCC3Q9ULS5 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.31■□□□□ 0.84
TMCC3Q9ULS5 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TMCC3Q9ULS5 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TMCC3Q9ULS5 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TMCC3Q9ULS5 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TMCC3Q9ULS5 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TMCC3Q9ULS5 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.3■□□□□ 0.84
TMCC3Q9ULS5 SNX5-217ENST00000606557 1087 ntBASIC20.3■□□□□ 0.84
TMCC3Q9ULS5 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
TMCC3Q9ULS5 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TMCC3Q9ULS5 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TMCC3Q9ULS5 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TMCC3Q9ULS5 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
TMCC3Q9ULS5 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
TMCC3Q9ULS5 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
TMCC3Q9ULS5 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TMCC3Q9ULS5 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TMCC3Q9ULS5 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.29■□□□□ 0.84
TMCC3Q9ULS5 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.29■□□□□ 0.84
TMCC3Q9ULS5 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.29■□□□□ 0.84
TMCC3Q9ULS5 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TMCC3Q9ULS5 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
TMCC3Q9ULS5 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TMCC3Q9ULS5 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.29■□□□□ 0.84
TMCC3Q9ULS5 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMCC3Q9ULS5 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMCC3Q9ULS5 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.28■□□□□ 0.84
TMCC3Q9ULS5 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMCC3Q9ULS5 LINC01529-204ENST00000636474 1715 ntBASIC20.28■□□□□ 0.84
TMCC3Q9ULS5 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMCC3Q9ULS5 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
TMCC3Q9ULS5 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
TMCC3Q9ULS5 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMCC3Q9ULS5 TSPY13P-201ENST00000338964 914 ntBASIC20.28■□□□□ 0.84
TMCC3Q9ULS5 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.28■□□□□ 0.84
TMCC3Q9ULS5 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.28■□□□□ 0.84
TMCC3Q9ULS5 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.28■□□□□ 0.84
TMCC3Q9ULS5 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMCC3Q9ULS5 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TMCC3Q9ULS5 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMCC3Q9ULS5 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TMCC3Q9ULS5 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMCC3Q9ULS5 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMCC3Q9ULS5 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMCC3Q9ULS5 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.28■□□□□ 0.84
TMCC3Q9ULS5 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMCC3Q9ULS5 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
TMCC3Q9ULS5 FBXW4P1-201ENST00000426721 2239 ntBASIC20.27■□□□□ 0.84
TMCC3Q9ULS5 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.27■□□□□ 0.84
TMCC3Q9ULS5 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TMCC3Q9ULS5 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
TMCC3Q9ULS5 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TMCC3Q9ULS5 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.27■□□□□ 0.84
TMCC3Q9ULS5 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TMCC3Q9ULS5 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TMCC3Q9ULS5 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.27■□□□□ 0.84
TMCC3Q9ULS5 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.27■□□□□ 0.84
TMCC3Q9ULS5 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.27■□□□□ 0.84
TMCC3Q9ULS5 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TMCC3Q9ULS5 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
TMCC3Q9ULS5 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
TMCC3Q9ULS5 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.26■□□□□ 0.83
TMCC3Q9ULS5 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.26■□□□□ 0.83
TMCC3Q9ULS5 MIR4508-201ENST00000584178 70 ntBASIC20.26■□□□□ 0.83
TMCC3Q9ULS5 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
TMCC3Q9ULS5 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC20.26■□□□□ 0.83
TMCC3Q9ULS5 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TMCC3Q9ULS5 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TMCC3Q9ULS5 AL024507.2-201ENST00000606070 2574 ntBASIC20.26■□□□□ 0.83
TMCC3Q9ULS5 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.26■□□□□ 0.83
TMCC3Q9ULS5 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TMCC3Q9ULS5 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TMCC3Q9ULS5 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TMCC3Q9ULS5 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.25■□□□□ 0.83
TMCC3Q9ULS5 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TMCC3Q9ULS5 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TMCC3Q9ULS5 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TMCC3Q9ULS5 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TMCC3Q9ULS5 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.25■□□□□ 0.83
TMCC3Q9ULS5 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.25■□□□□ 0.83
TMCC3Q9ULS5 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
TMCC3Q9ULS5 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.25■□□□□ 0.83
TMCC3Q9ULS5 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms