Protein–RNA interactions for Protein: Q9NUL5

RYDEN, Repressor of yield of DENV protein, humanhuman

Known RBP Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RYDENQ9NUL5 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.1■□□□□ 0.81
RYDENQ9NUL5 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
RYDENQ9NUL5 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.1■□□□□ 0.81
RYDENQ9NUL5 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.1■□□□□ 0.81
RYDENQ9NUL5 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.1■□□□□ 0.81
RYDENQ9NUL5 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RYDENQ9NUL5 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RYDENQ9NUL5 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.1■□□□□ 0.81
RYDENQ9NUL5 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RYDENQ9NUL5 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RYDENQ9NUL5 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
RYDENQ9NUL5 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RYDENQ9NUL5 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
RYDENQ9NUL5 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RYDENQ9NUL5 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RYDENQ9NUL5 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
RYDENQ9NUL5 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.09■□□□□ 0.81
RYDENQ9NUL5 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC20.09■□□□□ 0.81
RYDENQ9NUL5 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.09■□□□□ 0.81
RYDENQ9NUL5 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.09■□□□□ 0.81
RYDENQ9NUL5 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.09■□□□□ 0.81
RYDENQ9NUL5 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
RYDENQ9NUL5 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RYDENQ9NUL5 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
RYDENQ9NUL5 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
RYDENQ9NUL5 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RYDENQ9NUL5 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RYDENQ9NUL5 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RYDENQ9NUL5 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.08■□□□□ 0.81
RYDENQ9NUL5 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.08■□□□□ 0.81
RYDENQ9NUL5 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.08■□□□□ 0.81
RYDENQ9NUL5 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.08■□□□□ 0.81
RYDENQ9NUL5 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.8
RYDENQ9NUL5 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
RYDENQ9NUL5 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.8
RYDENQ9NUL5 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RYDENQ9NUL5 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RYDENQ9NUL5 ESRRAP2-201ENST00000418437 1549 ntBASIC20.07■□□□□ 0.8
RYDENQ9NUL5 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RYDENQ9NUL5 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.07■□□□□ 0.8
RYDENQ9NUL5 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RYDENQ9NUL5 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RYDENQ9NUL5 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RYDENQ9NUL5 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.07■□□□□ 0.8
RYDENQ9NUL5 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RYDENQ9NUL5 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RYDENQ9NUL5 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.06■□□□□ 0.8
RYDENQ9NUL5 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.06■□□□□ 0.8
RYDENQ9NUL5 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RYDENQ9NUL5 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RYDENQ9NUL5 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.06■□□□□ 0.8
RYDENQ9NUL5 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.06■□□□□ 0.8
RYDENQ9NUL5 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.06■□□□□ 0.8
RYDENQ9NUL5 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RYDENQ9NUL5 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RYDENQ9NUL5 MIR6821-201ENST00000617625 74 ntBASIC20.06■□□□□ 0.8
RYDENQ9NUL5 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RYDENQ9NUL5 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
RYDENQ9NUL5 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RYDENQ9NUL5 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
RYDENQ9NUL5 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.05■□□□□ 0.8
RYDENQ9NUL5 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.05■□□□□ 0.8
RYDENQ9NUL5 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RYDENQ9NUL5 DUSP8P5-201ENST00000422884 1815 ntBASIC20.05■□□□□ 0.8
RYDENQ9NUL5 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RYDENQ9NUL5 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RYDENQ9NUL5 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RYDENQ9NUL5 AC097381.1-201ENST00000429019 1296 ntBASIC20.05■□□□□ 0.8
RYDENQ9NUL5 YBX1P1-201ENST00000445822 960 ntBASIC20.05■□□□□ 0.8
RYDENQ9NUL5 AL034346.1-201ENST00000568244 1277 ntBASIC20.05■□□□□ 0.8
RYDENQ9NUL5 AC105233.4-201ENST00000642045 216 ntBASIC20.05■□□□□ 0.8
RYDENQ9NUL5 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RYDENQ9NUL5 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RYDENQ9NUL5 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RYDENQ9NUL5 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RYDENQ9NUL5 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.04■□□□□ 0.8
RYDENQ9NUL5 AC079089.2-201ENST00000531211 1277 ntBASIC20.04■□□□□ 0.8
RYDENQ9NUL5 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.04■□□□□ 0.8
RYDENQ9NUL5 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
RYDENQ9NUL5 LINC01960-201ENST00000563759 1884 ntBASIC20.04■□□□□ 0.8
RYDENQ9NUL5 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RYDENQ9NUL5 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RYDENQ9NUL5 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RYDENQ9NUL5 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RYDENQ9NUL5 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RYDENQ9NUL5 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RYDENQ9NUL5 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.03■□□□□ 0.8
RYDENQ9NUL5 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RYDENQ9NUL5 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
RYDENQ9NUL5 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RYDENQ9NUL5 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.03■□□□□ 0.8
RYDENQ9NUL5 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.03■□□□□ 0.8
RYDENQ9NUL5 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RYDENQ9NUL5 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
RYDENQ9NUL5 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RYDENQ9NUL5 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
RYDENQ9NUL5 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.02■□□□□ 0.8
RYDENQ9NUL5 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RYDENQ9NUL5 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RYDENQ9NUL5 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms