Protein–RNA interactions for Protein: Q9HCX3

ZNF304, Zinc finger protein 304, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF304Q9HCX3 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ZNF304Q9HCX3 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
ZNF304Q9HCX3 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZNF304Q9HCX3 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZNF304Q9HCX3 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZNF304Q9HCX3 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.81■□□□□ 0.92
ZNF304Q9HCX3 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.81■□□□□ 0.92
ZNF304Q9HCX3 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.81■□□□□ 0.92
ZNF304Q9HCX3 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
ZNF304Q9HCX3 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
ZNF304Q9HCX3 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.81■□□□□ 0.92
ZNF304Q9HCX3 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
ZNF304Q9HCX3 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.81■□□□□ 0.92
ZNF304Q9HCX3 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF304Q9HCX3 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF304Q9HCX3 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF304Q9HCX3 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF304Q9HCX3 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.8■□□□□ 0.92
ZNF304Q9HCX3 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF304Q9HCX3 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF304Q9HCX3 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF304Q9HCX3 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
ZNF304Q9HCX3 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF304Q9HCX3 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.8■□□□□ 0.92
ZNF304Q9HCX3 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.8■□□□□ 0.92
ZNF304Q9HCX3 AC068587.7-201ENST00000641602 218 ntBASIC20.8■□□□□ 0.92
ZNF304Q9HCX3 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
ZNF304Q9HCX3 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
ZNF304Q9HCX3 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF304Q9HCX3 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF304Q9HCX3 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.79■□□□□ 0.92
ZNF304Q9HCX3 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZNF304Q9HCX3 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
ZNF304Q9HCX3 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.79■□□□□ 0.92
ZNF304Q9HCX3 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZNF304Q9HCX3 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZNF304Q9HCX3 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZNF304Q9HCX3 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZNF304Q9HCX3 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.79■□□□□ 0.92
ZNF304Q9HCX3 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.79■□□□□ 0.92
ZNF304Q9HCX3 MIR572-201ENST00000384983 95 ntBASIC20.79■□□□□ 0.92
ZNF304Q9HCX3 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.79■□□□□ 0.92
ZNF304Q9HCX3 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.79■□□□□ 0.92
ZNF304Q9HCX3 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZNF304Q9HCX3 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZNF304Q9HCX3 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.79■□□□□ 0.92
ZNF304Q9HCX3 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.79■□□□□ 0.92
ZNF304Q9HCX3 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZNF304Q9HCX3 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZNF304Q9HCX3 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ZNF304Q9HCX3 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZNF304Q9HCX3 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF304Q9HCX3 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF304Q9HCX3 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF304Q9HCX3 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF304Q9HCX3 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF304Q9HCX3 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
ZNF304Q9HCX3 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF304Q9HCX3 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
ZNF304Q9HCX3 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF304Q9HCX3 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.78■□□□□ 0.92
ZNF304Q9HCX3 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF304Q9HCX3 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
ZNF304Q9HCX3 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF304Q9HCX3 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF304Q9HCX3 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.78■□□□□ 0.92
ZNF304Q9HCX3 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF304Q9HCX3 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.78■□□□□ 0.92
ZNF304Q9HCX3 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF304Q9HCX3 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF304Q9HCX3 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF304Q9HCX3 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.78■□□□□ 0.92
ZNF304Q9HCX3 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZNF304Q9HCX3 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.77■□□□□ 0.92
ZNF304Q9HCX3 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.77■□□□□ 0.92
ZNF304Q9HCX3 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
ZNF304Q9HCX3 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZNF304Q9HCX3 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.77■□□□□ 0.92
ZNF304Q9HCX3 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZNF304Q9HCX3 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZNF304Q9HCX3 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.77■□□□□ 0.92
ZNF304Q9HCX3 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ZNF304Q9HCX3 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZNF304Q9HCX3 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.77■□□□□ 0.92
ZNF304Q9HCX3 AC026271.2-201ENST00000428091 497 ntBASIC20.77■□□□□ 0.92
ZNF304Q9HCX3 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZNF304Q9HCX3 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.77■□□□□ 0.92
ZNF304Q9HCX3 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.77■□□□□ 0.92
ZNF304Q9HCX3 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
ZNF304Q9HCX3 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZNF304Q9HCX3 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.77■□□□□ 0.91
ZNF304Q9HCX3 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
ZNF304Q9HCX3 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF304Q9HCX3 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF304Q9HCX3 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF304Q9HCX3 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.76■□□□□ 0.91
ZNF304Q9HCX3 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF304Q9HCX3 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
ZNF304Q9HCX3 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
ZNF304Q9HCX3 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms