Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC22.88■■□□□ 1.25
RNF38Q9H0F5 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
RNF38Q9H0F5 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
RNF38Q9H0F5 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC22.88■■□□□ 1.25
RNF38Q9H0F5 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC22.88■■□□□ 1.25
RNF38Q9H0F5 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC22.88■■□□□ 1.25
RNF38Q9H0F5 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC22.88■■□□□ 1.25
RNF38Q9H0F5 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC22.88■■□□□ 1.25
RNF38Q9H0F5 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
RNF38Q9H0F5 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
RNF38Q9H0F5 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
RNF38Q9H0F5 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC22.87■■□□□ 1.25
RNF38Q9H0F5 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RNF38Q9H0F5 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RNF38Q9H0F5 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
RNF38Q9H0F5 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC22.87■■□□□ 1.25
RNF38Q9H0F5 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
RNF38Q9H0F5 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
RNF38Q9H0F5 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC22.87■■□□□ 1.25
RNF38Q9H0F5 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC22.87■■□□□ 1.25
RNF38Q9H0F5 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RNF38Q9H0F5 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC22.87■■□□□ 1.25
RNF38Q9H0F5 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
RNF38Q9H0F5 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC22.87■■□□□ 1.25
RNF38Q9H0F5 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC22.86■■□□□ 1.25
RNF38Q9H0F5 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC22.86■■□□□ 1.25
RNF38Q9H0F5 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
RNF38Q9H0F5 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
RNF38Q9H0F5 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
RNF38Q9H0F5 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
RNF38Q9H0F5 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
RNF38Q9H0F5 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
RNF38Q9H0F5 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC22.86■■□□□ 1.25
RNF38Q9H0F5 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
RNF38Q9H0F5 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
RNF38Q9H0F5 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC22.86■■□□□ 1.25
RNF38Q9H0F5 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
RNF38Q9H0F5 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
RNF38Q9H0F5 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC22.85■■□□□ 1.25
RNF38Q9H0F5 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC22.85■■□□□ 1.25
RNF38Q9H0F5 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
RNF38Q9H0F5 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC22.85■■□□□ 1.25
RNF38Q9H0F5 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
RNF38Q9H0F5 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
RNF38Q9H0F5 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
RNF38Q9H0F5 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC22.85■■□□□ 1.25
RNF38Q9H0F5 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC22.85■■□□□ 1.25
RNF38Q9H0F5 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC22.85■■□□□ 1.25
RNF38Q9H0F5 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
RNF38Q9H0F5 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC22.85■■□□□ 1.25
RNF38Q9H0F5 AC068587.7-201ENST00000641602 218 ntBASIC22.85■■□□□ 1.25
RNF38Q9H0F5 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC22.85■■□□□ 1.25
RNF38Q9H0F5 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC22.85■■□□□ 1.25
RNF38Q9H0F5 AC093323.1-202ENST00000635031 2045 ntBASIC22.85■■□□□ 1.25
RNF38Q9H0F5 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC22.85■■□□□ 1.25
RNF38Q9H0F5 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC22.85■■□□□ 1.25
RNF38Q9H0F5 MPST-204ENST00000404393 1329 ntTSL 5 BASIC22.84■■□□□ 1.25
RNF38Q9H0F5 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
RNF38Q9H0F5 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
RNF38Q9H0F5 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
RNF38Q9H0F5 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC22.84■■□□□ 1.25
RNF38Q9H0F5 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
RNF38Q9H0F5 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC22.84■■□□□ 1.25
RNF38Q9H0F5 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
RNF38Q9H0F5 NT5C3AP1-201ENST00000394500 1012 ntBASIC22.84■■□□□ 1.25
RNF38Q9H0F5 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
RNF38Q9H0F5 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
RNF38Q9H0F5 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC22.84■■□□□ 1.25
RNF38Q9H0F5 CCDC92B-201ENST00000575506 885 ntBASIC22.84■■□□□ 1.25
RNF38Q9H0F5 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
RNF38Q9H0F5 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
RNF38Q9H0F5 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
RNF38Q9H0F5 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC22.83■■□□□ 1.25
RNF38Q9H0F5 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC22.83■■□□□ 1.25
RNF38Q9H0F5 KRT18P5-201ENST00000436075 1291 ntBASIC22.83■■□□□ 1.25
RNF38Q9H0F5 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
RNF38Q9H0F5 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
RNF38Q9H0F5 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
RNF38Q9H0F5 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC22.83■■□□□ 1.25
RNF38Q9H0F5 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
RNF38Q9H0F5 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC22.83■■□□□ 1.25
RNF38Q9H0F5 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
RNF38Q9H0F5 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
RNF38Q9H0F5 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC22.83■■□□□ 1.24
RNF38Q9H0F5 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
RNF38Q9H0F5 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC22.82■■□□□ 1.24
RNF38Q9H0F5 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
RNF38Q9H0F5 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
RNF38Q9H0F5 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
RNF38Q9H0F5 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
RNF38Q9H0F5 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC22.82■■□□□ 1.24
RNF38Q9H0F5 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
RNF38Q9H0F5 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
RNF38Q9H0F5 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC22.81■■□□□ 1.24
RNF38Q9H0F5 GLI3-203ENST00000437480 451 ntTSL 2 BASIC22.81■■□□□ 1.24
RNF38Q9H0F5 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC22.81■■□□□ 1.24
RNF38Q9H0F5 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC22.81■■□□□ 1.24
RNF38Q9H0F5 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC22.81■■□□□ 1.24
RNF38Q9H0F5 TERF1P2-201ENST00000583350 1212 ntBASIC22.81■■□□□ 1.24
RNF38Q9H0F5 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms