Protein–RNA interactions for Protein: Q9BQ90

KLHDC3, Kelch domain-containing protein 3, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC3Q9BQ90 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KLHDC3Q9BQ90 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.05■□□□□ 0.8
KLHDC3Q9BQ90 AC233723.2-201ENST00000623798 2106 ntBASIC20.05■□□□□ 0.8
KLHDC3Q9BQ90 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.05■□□□□ 0.8
KLHDC3Q9BQ90 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KLHDC3Q9BQ90 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KLHDC3Q9BQ90 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.05■□□□□ 0.8
KLHDC3Q9BQ90 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.05■□□□□ 0.8
KLHDC3Q9BQ90 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.05■□□□□ 0.8
KLHDC3Q9BQ90 AC136469.2-201ENST00000623944 1028 ntBASIC20.05■□□□□ 0.8
KLHDC3Q9BQ90 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.05■□□□□ 0.8
KLHDC3Q9BQ90 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KLHDC3Q9BQ90 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
KLHDC3Q9BQ90 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
KLHDC3Q9BQ90 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
KLHDC3Q9BQ90 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
KLHDC3Q9BQ90 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
KLHDC3Q9BQ90 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
KLHDC3Q9BQ90 AC012676.1-201ENST00000574705 1949 ntBASIC20.04■□□□□ 0.8
KLHDC3Q9BQ90 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KLHDC3Q9BQ90 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.04■□□□□ 0.8
KLHDC3Q9BQ90 PBX2P1-201ENST00000493219 1291 ntBASIC20.04■□□□□ 0.8
KLHDC3Q9BQ90 DUX4L19-201ENST00000557448 1267 ntBASIC20.04■□□□□ 0.8
KLHDC3Q9BQ90 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
KLHDC3Q9BQ90 AC011298.3-201ENST00000615796 283 ntBASIC20.04■□□□□ 0.8
KLHDC3Q9BQ90 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.04■□□□□ 0.8
KLHDC3Q9BQ90 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KLHDC3Q9BQ90 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KLHDC3Q9BQ90 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.04■□□□□ 0.8
KLHDC3Q9BQ90 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.04■□□□□ 0.8
KLHDC3Q9BQ90 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
KLHDC3Q9BQ90 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
KLHDC3Q9BQ90 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC20.04■□□□□ 0.8
KLHDC3Q9BQ90 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
KLHDC3Q9BQ90 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.03■□□□□ 0.8
KLHDC3Q9BQ90 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
KLHDC3Q9BQ90 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
KLHDC3Q9BQ90 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
KLHDC3Q9BQ90 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KLHDC3Q9BQ90 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KLHDC3Q9BQ90 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.03■□□□□ 0.8
KLHDC3Q9BQ90 SLC47A1P1-202ENST00000449666 945 ntBASIC20.03■□□□□ 0.8
KLHDC3Q9BQ90 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.03■□□□□ 0.8
KLHDC3Q9BQ90 AL138724.1-201ENST00000606771 1088 ntBASIC20.03■□□□□ 0.8
KLHDC3Q9BQ90 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
KLHDC3Q9BQ90 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
KLHDC3Q9BQ90 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
KLHDC3Q9BQ90 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
KLHDC3Q9BQ90 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
KLHDC3Q9BQ90 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KLHDC3Q9BQ90 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.03■□□□□ 0.8
KLHDC3Q9BQ90 AC135279.3-201ENST00000610945 1311 ntBASIC20.02■□□□□ 0.8
KLHDC3Q9BQ90 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.02■□□□□ 0.8
KLHDC3Q9BQ90 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
KLHDC3Q9BQ90 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.02■□□□□ 0.8
KLHDC3Q9BQ90 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.02■□□□□ 0.8
KLHDC3Q9BQ90 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.02■□□□□ 0.8
KLHDC3Q9BQ90 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KLHDC3Q9BQ90 LINC01960-201ENST00000563759 1884 ntBASIC20.02■□□□□ 0.8
KLHDC3Q9BQ90 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KLHDC3Q9BQ90 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
KLHDC3Q9BQ90 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KLHDC3Q9BQ90 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
KLHDC3Q9BQ90 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
KLHDC3Q9BQ90 AC080038.3-201ENST00000623346 1952 ntBASIC20.01■□□□□ 0.79
KLHDC3Q9BQ90 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
KLHDC3Q9BQ90 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
KLHDC3Q9BQ90 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
KLHDC3Q9BQ90 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
KLHDC3Q9BQ90 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.01■□□□□ 0.79
KLHDC3Q9BQ90 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
KLHDC3Q9BQ90 AL031432.3-201ENST00000607698 485 ntBASIC20.01■□□□□ 0.79
KLHDC3Q9BQ90 AC106739.1-201ENST00000617035 715 ntBASIC20.01■□□□□ 0.79
KLHDC3Q9BQ90 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.01■□□□□ 0.79
KLHDC3Q9BQ90 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
KLHDC3Q9BQ90 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
KLHDC3Q9BQ90 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
KLHDC3Q9BQ90 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
KLHDC3Q9BQ90 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
KLHDC3Q9BQ90 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
KLHDC3Q9BQ90 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
KLHDC3Q9BQ90 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20■□□□□ 0.79
KLHDC3Q9BQ90 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20■□□□□ 0.79
KLHDC3Q9BQ90 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20■□□□□ 0.79
KLHDC3Q9BQ90 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20■□□□□ 0.79
KLHDC3Q9BQ90 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20■□□□□ 0.79
KLHDC3Q9BQ90 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
KLHDC3Q9BQ90 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
KLHDC3Q9BQ90 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20■□□□□ 0.79
KLHDC3Q9BQ90 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20■□□□□ 0.79
KLHDC3Q9BQ90 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20■□□□□ 0.79
KLHDC3Q9BQ90 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
KLHDC3Q9BQ90 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20■□□□□ 0.79
KLHDC3Q9BQ90 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
KLHDC3Q9BQ90 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
KLHDC3Q9BQ90 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.99■□□□□ 0.79
KLHDC3Q9BQ90 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
KLHDC3Q9BQ90 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
KLHDC3Q9BQ90 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
KLHDC3Q9BQ90 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms