Protein–RNA interactions for Protein: Q96M43

NBPF4, Neuroblastoma breakpoint family member 4, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF4Q96M43 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
NBPF4Q96M43 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC29.3■■■□□ 2.28
NBPF4Q96M43 GALNS-213ENST00000569433 723 ntTSL 3 BASIC29.3■■■□□ 2.28
NBPF4Q96M43 RAP2CP1-201ENST00000605103 478 ntBASIC29.3■■■□□ 2.28
NBPF4Q96M43 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC29.3■■■□□ 2.28
NBPF4Q96M43 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC29.29■■■□□ 2.28
NBPF4Q96M43 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC29.29■■■□□ 2.28
NBPF4Q96M43 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC29.29■■■□□ 2.28
NBPF4Q96M43 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
NBPF4Q96M43 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC29.29■■■□□ 2.28
NBPF4Q96M43 DENND3-207ENST00000518347 850 ntTSL 2 BASIC29.29■■■□□ 2.28
NBPF4Q96M43 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC29.29■■■□□ 2.28
NBPF4Q96M43 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC29.29■■■□□ 2.28
NBPF4Q96M43 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC29.29■■■□□ 2.28
NBPF4Q96M43 SMUG1P1-201ENST00000590640 811 ntBASIC29.29■■■□□ 2.28
NBPF4Q96M43 AC080038.1-201ENST00000611274 1154 ntBASIC29.29■■■□□ 2.28
NBPF4Q96M43 BX005040.4-201ENST00000637145 1518 ntBASIC29.29■■■□□ 2.28
NBPF4Q96M43 AC004854.2-201ENST00000608450 1441 ntBASIC29.28■■■□□ 2.28
NBPF4Q96M43 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
NBPF4Q96M43 ABCB10P4-201ENST00000566803 2184 ntBASIC29.28■■■□□ 2.28
NBPF4Q96M43 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC29.28■■■□□ 2.28
NBPF4Q96M43 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC29.28■■■□□ 2.28
NBPF4Q96M43 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC29.28■■■□□ 2.28
NBPF4Q96M43 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC29.28■■■□□ 2.28
NBPF4Q96M43 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC29.28■■■□□ 2.28
NBPF4Q96M43 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
NBPF4Q96M43 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
NBPF4Q96M43 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC29.27■■■□□ 2.28
NBPF4Q96M43 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC29.27■■■□□ 2.28
NBPF4Q96M43 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC29.27■■■□□ 2.28
NBPF4Q96M43 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC29.27■■■□□ 2.28
NBPF4Q96M43 STX7-201ENST00000367937 1090 ntTSL 5 BASIC29.27■■■□□ 2.28
NBPF4Q96M43 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
NBPF4Q96M43 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC29.27■■■□□ 2.28
NBPF4Q96M43 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC29.27■■■□□ 2.28
NBPF4Q96M43 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
NBPF4Q96M43 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC29.27■■■□□ 2.28
NBPF4Q96M43 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC29.26■■■□□ 2.27
NBPF4Q96M43 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
NBPF4Q96M43 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC29.26■■■□□ 2.27
NBPF4Q96M43 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
NBPF4Q96M43 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
NBPF4Q96M43 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC29.26■■■□□ 2.27
NBPF4Q96M43 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
NBPF4Q96M43 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC29.26■■■□□ 2.27
NBPF4Q96M43 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
NBPF4Q96M43 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC29.25■■■□□ 2.27
NBPF4Q96M43 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
NBPF4Q96M43 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC29.25■■■□□ 2.27
NBPF4Q96M43 COX20-201ENST00000366528 568 ntTSL 2 BASIC29.25■■■□□ 2.27
NBPF4Q96M43 CDCA4P2-201ENST00000441182 718 ntBASIC29.25■■■□□ 2.27
NBPF4Q96M43 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC29.25■■■□□ 2.27
NBPF4Q96M43 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
NBPF4Q96M43 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC29.24■■■□□ 2.27
NBPF4Q96M43 HLA-L-209ENST00000420110 1011 ntBASIC29.24■■■□□ 2.27
NBPF4Q96M43 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC29.24■■■□□ 2.27
NBPF4Q96M43 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC29.24■■■□□ 2.27
NBPF4Q96M43 AC068587.7-201ENST00000641602 218 ntBASIC29.24■■■□□ 2.27
NBPF4Q96M43 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
NBPF4Q96M43 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC29.23■■■□□ 2.27
NBPF4Q96M43 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC29.23■■■□□ 2.27
NBPF4Q96M43 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC29.23■■■□□ 2.27
NBPF4Q96M43 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC29.23■■■□□ 2.27
NBPF4Q96M43 AC137761.2-201ENST00000561729 223 ntBASIC29.23■■■□□ 2.27
NBPF4Q96M43 AC145350.3-201ENST00000569033 163 ntBASIC29.23■■■□□ 2.27
NBPF4Q96M43 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC29.23■■■□□ 2.27
NBPF4Q96M43 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
NBPF4Q96M43 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC29.23■■■□□ 2.27
NBPF4Q96M43 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
NBPF4Q96M43 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
NBPF4Q96M43 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
NBPF4Q96M43 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
NBPF4Q96M43 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC29.22■■■□□ 2.27
NBPF4Q96M43 HSCB-202ENST00000398941 955 ntTSL 2 BASIC29.22■■■□□ 2.27
NBPF4Q96M43 AC010141.3-201ENST00000456659 717 ntBASIC29.22■■■□□ 2.27
NBPF4Q96M43 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
NBPF4Q96M43 DBI-210ENST00000542275 757 ntTSL 5 BASIC29.22■■■□□ 2.27
NBPF4Q96M43 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC29.22■■■□□ 2.27
NBPF4Q96M43 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC29.22■■■□□ 2.27
NBPF4Q96M43 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC29.21■■■□□ 2.27
NBPF4Q96M43 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC29.21■■■□□ 2.27
NBPF4Q96M43 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC29.21■■■□□ 2.27
NBPF4Q96M43 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC29.21■■■□□ 2.27
NBPF4Q96M43 AC073111.5-205ENST00000641717 521 ntBASIC29.21■■■□□ 2.27
NBPF4Q96M43 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
NBPF4Q96M43 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
NBPF4Q96M43 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
NBPF4Q96M43 TK2-208ENST00000545043 1120 ntTSL 2 BASIC29.2■■■□□ 2.26
NBPF4Q96M43 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
NBPF4Q96M43 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
NBPF4Q96M43 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
NBPF4Q96M43 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
NBPF4Q96M43 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC29.19■■■□□ 2.26
NBPF4Q96M43 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC29.19■■■□□ 2.26
NBPF4Q96M43 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
NBPF4Q96M43 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC29.19■■■□□ 2.26
NBPF4Q96M43 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
NBPF4Q96M43 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
NBPF4Q96M43 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC29.18■■■□□ 2.26
NBPF4Q96M43 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC29.18■■■□□ 2.26
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms