Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RNF31Q96EP0 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
RNF31Q96EP0 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RNF31Q96EP0 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF31Q96EP0 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF31Q96EP0 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
RNF31Q96EP0 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.12■□□□□ 0.97
RNF31Q96EP0 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.12■□□□□ 0.97
RNF31Q96EP0 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF31Q96EP0 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF31Q96EP0 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.11■□□□□ 0.97
RNF31Q96EP0 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF31Q96EP0 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
RNF31Q96EP0 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RNF31Q96EP0 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF31Q96EP0 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF31Q96EP0 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.11■□□□□ 0.97
RNF31Q96EP0 IGHV3-19-201ENST00000521488 291 ntBASIC21.11■□□□□ 0.97
RNF31Q96EP0 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF31Q96EP0 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF31Q96EP0 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF31Q96EP0 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF31Q96EP0 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF31Q96EP0 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF31Q96EP0 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RNF31Q96EP0 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
RNF31Q96EP0 LINC01529-204ENST00000636474 1715 ntBASIC21.1■□□□□ 0.97
RNF31Q96EP0 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF31Q96EP0 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF31Q96EP0 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.1■□□□□ 0.97
RNF31Q96EP0 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.1■□□□□ 0.97
RNF31Q96EP0 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RNF31Q96EP0 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.1■□□□□ 0.97
RNF31Q96EP0 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF31Q96EP0 AC004687.1-201ENST00000579003 1625 ntBASIC21.1■□□□□ 0.97
RNF31Q96EP0 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF31Q96EP0 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.09■□□□□ 0.97
RNF31Q96EP0 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF31Q96EP0 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.09■□□□□ 0.97
RNF31Q96EP0 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RNF31Q96EP0 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF31Q96EP0 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF31Q96EP0 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
RNF31Q96EP0 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.09■□□□□ 0.97
RNF31Q96EP0 AL499627.2-201ENST00000606283 725 ntBASIC21.09■□□□□ 0.97
RNF31Q96EP0 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.09■□□□□ 0.97
RNF31Q96EP0 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.09■□□□□ 0.97
RNF31Q96EP0 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.09■□□□□ 0.97
RNF31Q96EP0 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
RNF31Q96EP0 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RNF31Q96EP0 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.97
RNF31Q96EP0 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RNF31Q96EP0 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RNF31Q96EP0 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RNF31Q96EP0 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RNF31Q96EP0 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RNF31Q96EP0 DUX4L2-201ENST00000561772 1275 ntBASIC21.08■□□□□ 0.97
RNF31Q96EP0 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.08■□□□□ 0.97
RNF31Q96EP0 DUX4L6-201ENST00000626483 1275 ntBASIC21.08■□□□□ 0.97
RNF31Q96EP0 DUX4L1-201ENST00000627662 1275 ntBASIC21.08■□□□□ 0.97
RNF31Q96EP0 DUX4L8-201ENST00000629013 1275 ntBASIC21.08■□□□□ 0.97
RNF31Q96EP0 DUX4L3-201ENST00000630187 1275 ntBASIC21.08■□□□□ 0.97
RNF31Q96EP0 DUX4L7-201ENST00000630678 1275 ntBASIC21.08■□□□□ 0.97
RNF31Q96EP0 DUX4L5-201ENST00000630834 1275 ntBASIC21.08■□□□□ 0.97
RNF31Q96EP0 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.07■□□□□ 0.96
RNF31Q96EP0 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
RNF31Q96EP0 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF31Q96EP0 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.07■□□□□ 0.96
RNF31Q96EP0 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
RNF31Q96EP0 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RNF31Q96EP0 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.07■□□□□ 0.96
RNF31Q96EP0 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF31Q96EP0 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF31Q96EP0 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.07■□□□□ 0.96
RNF31Q96EP0 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF31Q96EP0 DUX4L4-201ENST00000566884 1269 ntBASIC21.07■□□□□ 0.96
RNF31Q96EP0 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
RNF31Q96EP0 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF31Q96EP0 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF31Q96EP0 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
RNF31Q96EP0 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
RNF31Q96EP0 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
RNF31Q96EP0 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF31Q96EP0 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.06■□□□□ 0.96
RNF31Q96EP0 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.06■□□□□ 0.96
RNF31Q96EP0 KRT18P5-201ENST00000436075 1291 ntBASIC21.06■□□□□ 0.96
RNF31Q96EP0 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
RNF31Q96EP0 AC012414.1-201ENST00000556676 535 ntBASIC21.06■□□□□ 0.96
RNF31Q96EP0 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RNF31Q96EP0 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RNF31Q96EP0 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF31Q96EP0 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
RNF31Q96EP0 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF31Q96EP0 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.05■□□□□ 0.96
RNF31Q96EP0 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RNF31Q96EP0 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF31Q96EP0 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF31Q96EP0 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RNF31Q96EP0 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.05■□□□□ 0.96
RNF31Q96EP0 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms