Protein–RNA interactions for Protein: Q96AK3

APOBEC3D, DNA dC->dU-editing enzyme APOBEC-3D, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3DQ96AK3 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
APOBEC3DQ96AK3 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
APOBEC3DQ96AK3 LINC01960-201ENST00000563759 1884 ntBASIC19.03■□□□□ 0.64
APOBEC3DQ96AK3 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.03■□□□□ 0.64
APOBEC3DQ96AK3 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
APOBEC3DQ96AK3 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
APOBEC3DQ96AK3 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.03■□□□□ 0.64
APOBEC3DQ96AK3 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.03■□□□□ 0.64
APOBEC3DQ96AK3 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
APOBEC3DQ96AK3 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
APOBEC3DQ96AK3 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
APOBEC3DQ96AK3 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.02■□□□□ 0.64
APOBEC3DQ96AK3 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.02■□□□□ 0.64
APOBEC3DQ96AK3 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.02■□□□□ 0.64
APOBEC3DQ96AK3 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
APOBEC3DQ96AK3 SERBP1P1-201ENST00000396021 1160 ntBASIC19.02■□□□□ 0.64
APOBEC3DQ96AK3 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.02■□□□□ 0.64
APOBEC3DQ96AK3 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
APOBEC3DQ96AK3 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
APOBEC3DQ96AK3 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
APOBEC3DQ96AK3 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
APOBEC3DQ96AK3 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
APOBEC3DQ96AK3 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
APOBEC3DQ96AK3 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
APOBEC3DQ96AK3 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
APOBEC3DQ96AK3 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.01■□□□□ 0.63
APOBEC3DQ96AK3 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
APOBEC3DQ96AK3 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
APOBEC3DQ96AK3 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
APOBEC3DQ96AK3 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.01■□□□□ 0.63
APOBEC3DQ96AK3 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.01■□□□□ 0.63
APOBEC3DQ96AK3 AC011298.3-201ENST00000615796 283 ntBASIC19.01■□□□□ 0.63
APOBEC3DQ96AK3 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
APOBEC3DQ96AK3 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
APOBEC3DQ96AK3 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19■□□□□ 0.63
APOBEC3DQ96AK3 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
APOBEC3DQ96AK3 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
APOBEC3DQ96AK3 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19■□□□□ 0.63
APOBEC3DQ96AK3 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19■□□□□ 0.63
APOBEC3DQ96AK3 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19■□□□□ 0.63
APOBEC3DQ96AK3 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
APOBEC3DQ96AK3 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19■□□□□ 0.63
APOBEC3DQ96AK3 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
APOBEC3DQ96AK3 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
APOBEC3DQ96AK3 AC127496.7-201ENST00000625110 1798 ntBASIC18.99■□□□□ 0.63
APOBEC3DQ96AK3 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
APOBEC3DQ96AK3 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
APOBEC3DQ96AK3 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
APOBEC3DQ96AK3 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.99■□□□□ 0.63
APOBEC3DQ96AK3 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
APOBEC3DQ96AK3 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
APOBEC3DQ96AK3 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
APOBEC3DQ96AK3 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
APOBEC3DQ96AK3 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
APOBEC3DQ96AK3 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
APOBEC3DQ96AK3 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
APOBEC3DQ96AK3 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC18.99■□□□□ 0.63
APOBEC3DQ96AK3 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
APOBEC3DQ96AK3 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.98■□□□□ 0.63
APOBEC3DQ96AK3 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
APOBEC3DQ96AK3 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
APOBEC3DQ96AK3 AC087742.1-201ENST00000575880 1738 ntBASIC18.98■□□□□ 0.63
APOBEC3DQ96AK3 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
APOBEC3DQ96AK3 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.98■□□□□ 0.63
APOBEC3DQ96AK3 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC18.98■□□□□ 0.63
APOBEC3DQ96AK3 AC136469.2-201ENST00000623944 1028 ntBASIC18.98■□□□□ 0.63
APOBEC3DQ96AK3 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
APOBEC3DQ96AK3 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
APOBEC3DQ96AK3 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.98■□□□□ 0.63
APOBEC3DQ96AK3 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
APOBEC3DQ96AK3 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
APOBEC3DQ96AK3 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
APOBEC3DQ96AK3 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
APOBEC3DQ96AK3 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.97■□□□□ 0.63
APOBEC3DQ96AK3 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
APOBEC3DQ96AK3 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
APOBEC3DQ96AK3 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
APOBEC3DQ96AK3 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
APOBEC3DQ96AK3 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
APOBEC3DQ96AK3 OR2I1P-207ENST00000453522 948 ntBASIC18.97■□□□□ 0.63
APOBEC3DQ96AK3 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC18.97■□□□□ 0.63
APOBEC3DQ96AK3 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
APOBEC3DQ96AK3 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.97■□□□□ 0.63
APOBEC3DQ96AK3 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
APOBEC3DQ96AK3 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
APOBEC3DQ96AK3 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
APOBEC3DQ96AK3 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
APOBEC3DQ96AK3 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
APOBEC3DQ96AK3 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
APOBEC3DQ96AK3 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
APOBEC3DQ96AK3 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
APOBEC3DQ96AK3 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
APOBEC3DQ96AK3 AL117328.2-201ENST00000624617 1940 ntBASIC18.96■□□□□ 0.63
APOBEC3DQ96AK3 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
APOBEC3DQ96AK3 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
APOBEC3DQ96AK3 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
APOBEC3DQ96AK3 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
APOBEC3DQ96AK3 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
APOBEC3DQ96AK3 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
APOBEC3DQ96AK3 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms