Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC12.12□□□□□ -0.47
SPTSSBQ8NFR3 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SPTSSBQ8NFR3 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SPTSSBQ8NFR3 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SPTSSBQ8NFR3 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SPTSSBQ8NFR3 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
SPTSSBQ8NFR3 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SPTSSBQ8NFR3 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC12.11□□□□□ -0.47
SPTSSBQ8NFR3 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
SPTSSBQ8NFR3 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
SPTSSBQ8NFR3 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SPTSSBQ8NFR3 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SPTSSBQ8NFR3 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SPTSSBQ8NFR3 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
SPTSSBQ8NFR3 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
SPTSSBQ8NFR3 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC12.11□□□□□ -0.47
SPTSSBQ8NFR3 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SPTSSBQ8NFR3 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC12.11□□□□□ -0.47
SPTSSBQ8NFR3 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC12.11□□□□□ -0.47
SPTSSBQ8NFR3 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SPTSSBQ8NFR3 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SPTSSBQ8NFR3 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SPTSSBQ8NFR3 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
SPTSSBQ8NFR3 AC233723.2-201ENST00000623798 2106 ntBASIC12.11□□□□□ -0.47
SPTSSBQ8NFR3 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC12.11□□□□□ -0.47
SPTSSBQ8NFR3 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SPTSSBQ8NFR3 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SPTSSBQ8NFR3 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SPTSSBQ8NFR3 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC12.11□□□□□ -0.47
SPTSSBQ8NFR3 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
SPTSSBQ8NFR3 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SPTSSBQ8NFR3 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
SPTSSBQ8NFR3 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
SPTSSBQ8NFR3 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SPTSSBQ8NFR3 RARG-204ENST00000543726 1779 ntTSL 2 BASIC12.1□□□□□ -0.47
SPTSSBQ8NFR3 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
SPTSSBQ8NFR3 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SPTSSBQ8NFR3 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
SPTSSBQ8NFR3 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SPTSSBQ8NFR3 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SPTSSBQ8NFR3 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
SPTSSBQ8NFR3 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
SPTSSBQ8NFR3 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC12.1□□□□□ -0.47
SPTSSBQ8NFR3 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SPTSSBQ8NFR3 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SPTSSBQ8NFR3 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SPTSSBQ8NFR3 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
SPTSSBQ8NFR3 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SPTSSBQ8NFR3 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SPTSSBQ8NFR3 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SPTSSBQ8NFR3 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SPTSSBQ8NFR3 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SPTSSBQ8NFR3 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC12.1□□□□□ -0.47
SPTSSBQ8NFR3 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC12.1□□□□□ -0.47
SPTSSBQ8NFR3 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SPTSSBQ8NFR3 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
SPTSSBQ8NFR3 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC12.1□□□□□ -0.47
SPTSSBQ8NFR3 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SPTSSBQ8NFR3 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SPTSSBQ8NFR3 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SPTSSBQ8NFR3 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SPTSSBQ8NFR3 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SPTSSBQ8NFR3 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
SPTSSBQ8NFR3 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
SPTSSBQ8NFR3 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SPTSSBQ8NFR3 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SPTSSBQ8NFR3 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SPTSSBQ8NFR3 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SPTSSBQ8NFR3 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
SPTSSBQ8NFR3 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SPTSSBQ8NFR3 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
SPTSSBQ8NFR3 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SPTSSBQ8NFR3 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
SPTSSBQ8NFR3 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SPTSSBQ8NFR3 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
SPTSSBQ8NFR3 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC12.09□□□□□ -0.47
SPTSSBQ8NFR3 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
SPTSSBQ8NFR3 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC12.09□□□□□ -0.47
SPTSSBQ8NFR3 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
SPTSSBQ8NFR3 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC12.09□□□□□ -0.47
SPTSSBQ8NFR3 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SPTSSBQ8NFR3 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC12.09□□□□□ -0.47
SPTSSBQ8NFR3 GALC-202ENST00000393568 2054 ntTSL 2 BASIC12.09□□□□□ -0.47
SPTSSBQ8NFR3 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
SPTSSBQ8NFR3 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
SPTSSBQ8NFR3 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SPTSSBQ8NFR3 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
SPTSSBQ8NFR3 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SPTSSBQ8NFR3 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SPTSSBQ8NFR3 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC12.09□□□□□ -0.47
SPTSSBQ8NFR3 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC12.08□□□□□ -0.47
SPTSSBQ8NFR3 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SPTSSBQ8NFR3 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
SPTSSBQ8NFR3 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
SPTSSBQ8NFR3 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SPTSSBQ8NFR3 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SPTSSBQ8NFR3 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
SPTSSBQ8NFR3 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC12.08□□□□□ -0.48
SPTSSBQ8NFR3 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC12.08□□□□□ -0.48
SPTSSBQ8NFR3 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms