Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
HIPK4Q8NE63 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HIPK4Q8NE63 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
HIPK4Q8NE63 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.25■□□□□ 0.99
HIPK4Q8NE63 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.25■□□□□ 0.99
HIPK4Q8NE63 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HIPK4Q8NE63 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
HIPK4Q8NE63 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HIPK4Q8NE63 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.24■□□□□ 0.99
HIPK4Q8NE63 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.24■□□□□ 0.99
HIPK4Q8NE63 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
HIPK4Q8NE63 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
HIPK4Q8NE63 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
HIPK4Q8NE63 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HIPK4Q8NE63 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
HIPK4Q8NE63 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HIPK4Q8NE63 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
HIPK4Q8NE63 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.24■□□□□ 0.99
HIPK4Q8NE63 AC131274.2-201ENST00000580697 1507 ntBASIC21.24■□□□□ 0.99
HIPK4Q8NE63 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.24■□□□□ 0.99
HIPK4Q8NE63 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.24■□□□□ 0.99
HIPK4Q8NE63 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
HIPK4Q8NE63 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
HIPK4Q8NE63 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HIPK4Q8NE63 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
HIPK4Q8NE63 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HIPK4Q8NE63 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.23■□□□□ 0.99
HIPK4Q8NE63 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
HIPK4Q8NE63 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HIPK4Q8NE63 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
HIPK4Q8NE63 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HIPK4Q8NE63 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HIPK4Q8NE63 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HIPK4Q8NE63 ALDH1A3-203ENST00000557963 1670 ntBASIC21.22■□□□□ 0.99
HIPK4Q8NE63 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.22■□□□□ 0.99
HIPK4Q8NE63 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
HIPK4Q8NE63 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HIPK4Q8NE63 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HIPK4Q8NE63 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HIPK4Q8NE63 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HIPK4Q8NE63 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HIPK4Q8NE63 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HIPK4Q8NE63 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HIPK4Q8NE63 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HIPK4Q8NE63 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
HIPK4Q8NE63 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HIPK4Q8NE63 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HIPK4Q8NE63 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HIPK4Q8NE63 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HIPK4Q8NE63 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.21■□□□□ 0.99
HIPK4Q8NE63 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
HIPK4Q8NE63 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HIPK4Q8NE63 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
HIPK4Q8NE63 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.21■□□□□ 0.99
HIPK4Q8NE63 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.21■□□□□ 0.99
HIPK4Q8NE63 AC139795.1-202ENST00000500444 432 ntBASIC21.21■□□□□ 0.99
HIPK4Q8NE63 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
HIPK4Q8NE63 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.21■□□□□ 0.99
HIPK4Q8NE63 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
HIPK4Q8NE63 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
HIPK4Q8NE63 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
HIPK4Q8NE63 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HIPK4Q8NE63 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.2■□□□□ 0.98
HIPK4Q8NE63 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HIPK4Q8NE63 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HIPK4Q8NE63 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HIPK4Q8NE63 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HIPK4Q8NE63 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC21.2■□□□□ 0.98
HIPK4Q8NE63 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HIPK4Q8NE63 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HIPK4Q8NE63 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
HIPK4Q8NE63 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HIPK4Q8NE63 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.2■□□□□ 0.98
HIPK4Q8NE63 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.2■□□□□ 0.98
HIPK4Q8NE63 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.2■□□□□ 0.98
HIPK4Q8NE63 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
HIPK4Q8NE63 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HIPK4Q8NE63 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HIPK4Q8NE63 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HIPK4Q8NE63 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HIPK4Q8NE63 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
HIPK4Q8NE63 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
HIPK4Q8NE63 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC21.19■□□□□ 0.98
HIPK4Q8NE63 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HIPK4Q8NE63 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HIPK4Q8NE63 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HIPK4Q8NE63 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
HIPK4Q8NE63 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HIPK4Q8NE63 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
HIPK4Q8NE63 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
HIPK4Q8NE63 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
HIPK4Q8NE63 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HIPK4Q8NE63 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HIPK4Q8NE63 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HIPK4Q8NE63 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
HIPK4Q8NE63 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HIPK4Q8NE63 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HIPK4Q8NE63 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HIPK4Q8NE63 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HIPK4Q8NE63 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms