Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CPEB3Q8NE35 AL138724.1-201ENST00000606771 1088 ntBASIC19.21■□□□□ 0.67
CPEB3Q8NE35 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.21■□□□□ 0.67
CPEB3Q8NE35 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CPEB3Q8NE35 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPEB3Q8NE35 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPEB3Q8NE35 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CPEB3Q8NE35 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CPEB3Q8NE35 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPEB3Q8NE35 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CPEB3Q8NE35 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPEB3Q8NE35 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPEB3Q8NE35 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CPEB3Q8NE35 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CPEB3Q8NE35 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPEB3Q8NE35 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.2■□□□□ 0.66
CPEB3Q8NE35 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPEB3Q8NE35 AC012676.1-201ENST00000574705 1949 ntBASIC19.19■□□□□ 0.66
CPEB3Q8NE35 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.19■□□□□ 0.66
CPEB3Q8NE35 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.19■□□□□ 0.66
CPEB3Q8NE35 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPEB3Q8NE35 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPEB3Q8NE35 AC096631.2-201ENST00000436136 790 ntBASIC19.19■□□□□ 0.66
CPEB3Q8NE35 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.19■□□□□ 0.66
CPEB3Q8NE35 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CPEB3Q8NE35 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
CPEB3Q8NE35 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
CPEB3Q8NE35 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPEB3Q8NE35 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPEB3Q8NE35 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CPEB3Q8NE35 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPEB3Q8NE35 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CPEB3Q8NE35 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPEB3Q8NE35 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPEB3Q8NE35 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPEB3Q8NE35 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CPEB3Q8NE35 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CPEB3Q8NE35 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.18■□□□□ 0.66
CPEB3Q8NE35 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.18■□□□□ 0.66
CPEB3Q8NE35 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CPEB3Q8NE35 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CPEB3Q8NE35 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.18■□□□□ 0.66
CPEB3Q8NE35 AC011298.3-201ENST00000615796 283 ntBASIC19.18■□□□□ 0.66
CPEB3Q8NE35 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CPEB3Q8NE35 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CPEB3Q8NE35 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.18■□□□□ 0.66
CPEB3Q8NE35 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CPEB3Q8NE35 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CPEB3Q8NE35 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CPEB3Q8NE35 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CPEB3Q8NE35 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.17■□□□□ 0.66
CPEB3Q8NE35 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CPEB3Q8NE35 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
CPEB3Q8NE35 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.17■□□□□ 0.66
CPEB3Q8NE35 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.17■□□□□ 0.66
CPEB3Q8NE35 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.17■□□□□ 0.66
CPEB3Q8NE35 AL136162.1-201ENST00000607711 1078 ntBASIC19.17■□□□□ 0.66
CPEB3Q8NE35 AC136469.2-201ENST00000623944 1028 ntBASIC19.17■□□□□ 0.66
CPEB3Q8NE35 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CPEB3Q8NE35 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CPEB3Q8NE35 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CPEB3Q8NE35 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.17■□□□□ 0.66
CPEB3Q8NE35 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.17■□□□□ 0.66
CPEB3Q8NE35 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CPEB3Q8NE35 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
CPEB3Q8NE35 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CPEB3Q8NE35 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CPEB3Q8NE35 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CPEB3Q8NE35 AC024257.2-201ENST00000549699 147 ntBASIC19.16■□□□□ 0.66
CPEB3Q8NE35 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CPEB3Q8NE35 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.16■□□□□ 0.66
CPEB3Q8NE35 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.16■□□□□ 0.66
CPEB3Q8NE35 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CPEB3Q8NE35 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CPEB3Q8NE35 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CPEB3Q8NE35 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.16■□□□□ 0.66
CPEB3Q8NE35 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.16■□□□□ 0.66
CPEB3Q8NE35 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
CPEB3Q8NE35 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CPEB3Q8NE35 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPEB3Q8NE35 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.15■□□□□ 0.66
CPEB3Q8NE35 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CPEB3Q8NE35 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.15■□□□□ 0.66
CPEB3Q8NE35 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CPEB3Q8NE35 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
CPEB3Q8NE35 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.15■□□□□ 0.66
CPEB3Q8NE35 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPEB3Q8NE35 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CPEB3Q8NE35 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.15■□□□□ 0.66
CPEB3Q8NE35 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPEB3Q8NE35 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPEB3Q8NE35 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPEB3Q8NE35 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CPEB3Q8NE35 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
CPEB3Q8NE35 AC087742.1-201ENST00000575880 1738 ntBASIC19.14■□□□□ 0.66
CPEB3Q8NE35 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.14■□□□□ 0.66
CPEB3Q8NE35 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CPEB3Q8NE35 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CPEB3Q8NE35 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CPEB3Q8NE35 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms