Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.01■□□□□ 0.95
ZNF248Q8NDW4 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.01■□□□□ 0.95
ZNF248Q8NDW4 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF248Q8NDW4 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF248Q8NDW4 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF248Q8NDW4 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF248Q8NDW4 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF248Q8NDW4 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF248Q8NDW4 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
ZNF248Q8NDW4 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21■□□□□ 0.95
ZNF248Q8NDW4 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21■□□□□ 0.95
ZNF248Q8NDW4 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21■□□□□ 0.95
ZNF248Q8NDW4 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
ZNF248Q8NDW4 MAP2K4P1-201ENST00000438453 1195 ntBASIC21■□□□□ 0.95
ZNF248Q8NDW4 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21■□□□□ 0.95
ZNF248Q8NDW4 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21■□□□□ 0.95
ZNF248Q8NDW4 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21■□□□□ 0.95
ZNF248Q8NDW4 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21■□□□□ 0.95
ZNF248Q8NDW4 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
ZNF248Q8NDW4 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21■□□□□ 0.95
ZNF248Q8NDW4 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ZNF248Q8NDW4 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ZNF248Q8NDW4 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
ZNF248Q8NDW4 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZNF248Q8NDW4 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZNF248Q8NDW4 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZNF248Q8NDW4 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZNF248Q8NDW4 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZNF248Q8NDW4 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.99■□□□□ 0.95
ZNF248Q8NDW4 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.99■□□□□ 0.95
ZNF248Q8NDW4 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.99■□□□□ 0.95
ZNF248Q8NDW4 KRT18P61-201ENST00000585825 1298 ntBASIC20.99■□□□□ 0.95
ZNF248Q8NDW4 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.99■□□□□ 0.95
ZNF248Q8NDW4 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.99■□□□□ 0.95
ZNF248Q8NDW4 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZNF248Q8NDW4 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ZNF248Q8NDW4 LINC01124-201ENST00000409786 2117 ntBASIC20.99■□□□□ 0.95
ZNF248Q8NDW4 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
ZNF248Q8NDW4 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZNF248Q8NDW4 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZNF248Q8NDW4 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZNF248Q8NDW4 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ZNF248Q8NDW4 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ZNF248Q8NDW4 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ZNF248Q8NDW4 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
ZNF248Q8NDW4 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ZNF248Q8NDW4 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ZNF248Q8NDW4 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.98■□□□□ 0.95
ZNF248Q8NDW4 AC093323.1-202ENST00000635031 2045 ntBASIC20.98■□□□□ 0.95
ZNF248Q8NDW4 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ZNF248Q8NDW4 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.97■□□□□ 0.95
ZNF248Q8NDW4 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZNF248Q8NDW4 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
ZNF248Q8NDW4 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ZNF248Q8NDW4 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ZNF248Q8NDW4 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.96■□□□□ 0.95
ZNF248Q8NDW4 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ZNF248Q8NDW4 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ZNF248Q8NDW4 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
ZNF248Q8NDW4 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ZNF248Q8NDW4 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ZNF248Q8NDW4 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
ZNF248Q8NDW4 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ZNF248Q8NDW4 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.96■□□□□ 0.95
ZNF248Q8NDW4 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
ZNF248Q8NDW4 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.96■□□□□ 0.95
ZNF248Q8NDW4 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
ZNF248Q8NDW4 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ZNF248Q8NDW4 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
ZNF248Q8NDW4 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ZNF248Q8NDW4 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
ZNF248Q8NDW4 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ZNF248Q8NDW4 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.95■□□□□ 0.94
ZNF248Q8NDW4 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.95■□□□□ 0.94
ZNF248Q8NDW4 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.95■□□□□ 0.94
ZNF248Q8NDW4 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
ZNF248Q8NDW4 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.95■□□□□ 0.94
ZNF248Q8NDW4 CROCCP5-201ENST00000436658 830 ntBASIC20.95■□□□□ 0.94
ZNF248Q8NDW4 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.95■□□□□ 0.94
ZNF248Q8NDW4 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ZNF248Q8NDW4 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
ZNF248Q8NDW4 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.95■□□□□ 0.94
ZNF248Q8NDW4 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF248Q8NDW4 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF248Q8NDW4 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF248Q8NDW4 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF248Q8NDW4 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
ZNF248Q8NDW4 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF248Q8NDW4 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF248Q8NDW4 KRT19P1-201ENST00000405746 1186 ntBASIC20.94■□□□□ 0.94
ZNF248Q8NDW4 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
ZNF248Q8NDW4 NCF1B-203ENST00000435988 1254 ntBASIC20.94■□□□□ 0.94
ZNF248Q8NDW4 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
ZNF248Q8NDW4 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.94■□□□□ 0.94
ZNF248Q8NDW4 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.94■□□□□ 0.94
ZNF248Q8NDW4 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF248Q8NDW4 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF248Q8NDW4 FP325331.1-202ENST00000623531 1380 ntBASIC20.94■□□□□ 0.94
ZNF248Q8NDW4 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF248Q8NDW4 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms