Protein–RNA interactions for Protein: Q8NDA2

HMCN2, Hemicentin-2, humanhuman

Predictions only

Length 5,059 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN2Q8NDA2 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC12.59□□□□□ -0.39
HMCN2Q8NDA2 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HMCN2Q8NDA2 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HMCN2Q8NDA2 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HMCN2Q8NDA2 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HMCN2Q8NDA2 AP004609.3-201ENST00000610705 1884 ntBASIC12.59□□□□□ -0.39
HMCN2Q8NDA2 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HMCN2Q8NDA2 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
HMCN2Q8NDA2 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HMCN2Q8NDA2 NT5C-211ENST00000582170 653 ntTSL 3 BASIC12.59□□□□□ -0.39
HMCN2Q8NDA2 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HMCN2Q8NDA2 USF2-207ENST00000595068 1612 ntTSL 5 BASIC12.59□□□□□ -0.39
HMCN2Q8NDA2 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
HMCN2Q8NDA2 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
HMCN2Q8NDA2 UBE2SP1-201ENST00000450587 669 ntBASIC12.58□□□□□ -0.39
HMCN2Q8NDA2 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC12.58□□□□□ -0.39
HMCN2Q8NDA2 MIR4758-201ENST00000577688 71 ntBASIC12.58□□□□□ -0.39
HMCN2Q8NDA2 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
HMCN2Q8NDA2 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
HMCN2Q8NDA2 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC12.58□□□□□ -0.4
HMCN2Q8NDA2 CYP2T1P-201ENST00000432607 1285 ntBASIC12.58□□□□□ -0.4
HMCN2Q8NDA2 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC12.58□□□□□ -0.4
HMCN2Q8NDA2 TK2-213ENST00000563369 882 ntTSL 5 BASIC12.58□□□□□ -0.4
HMCN2Q8NDA2 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HMCN2Q8NDA2 KRT87P-202ENST00000534226 1464 ntBASIC12.58□□□□□ -0.4
HMCN2Q8NDA2 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC12.58□□□□□ -0.4
HMCN2Q8NDA2 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
HMCN2Q8NDA2 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
HMCN2Q8NDA2 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HMCN2Q8NDA2 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC12.58□□□□□ -0.4
HMCN2Q8NDA2 PHB2-213ENST00000546111 858 ntTSL 2 BASIC12.58□□□□□ -0.4
HMCN2Q8NDA2 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
HMCN2Q8NDA2 C2orf69P4-201ENST00000565394 541 ntBASIC12.58□□□□□ -0.4
HMCN2Q8NDA2 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
HMCN2Q8NDA2 ARMC10P1-201ENST00000313754 855 ntBASIC12.57□□□□□ -0.4
HMCN2Q8NDA2 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC12.57□□□□□ -0.4
HMCN2Q8NDA2 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC12.57□□□□□ -0.4
HMCN2Q8NDA2 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HMCN2Q8NDA2 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC12.57□□□□□ -0.4
HMCN2Q8NDA2 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC12.57□□□□□ -0.4
HMCN2Q8NDA2 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HMCN2Q8NDA2 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HMCN2Q8NDA2 AC007322.4-201ENST00000509611 723 ntBASIC12.57□□□□□ -0.4
HMCN2Q8NDA2 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC12.57□□□□□ -0.4
HMCN2Q8NDA2 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC12.57□□□□□ -0.4
HMCN2Q8NDA2 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
HMCN2Q8NDA2 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
HMCN2Q8NDA2 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HMCN2Q8NDA2 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HMCN2Q8NDA2 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC12.57□□□□□ -0.4
HMCN2Q8NDA2 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
HMCN2Q8NDA2 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
HMCN2Q8NDA2 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HMCN2Q8NDA2 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HMCN2Q8NDA2 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
HMCN2Q8NDA2 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
HMCN2Q8NDA2 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
HMCN2Q8NDA2 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC12.56□□□□□ -0.4
HMCN2Q8NDA2 AC079140.4-201ENST00000507448 529 ntBASIC12.56□□□□□ -0.4
HMCN2Q8NDA2 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
HMCN2Q8NDA2 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC12.56□□□□□ -0.4
HMCN2Q8NDA2 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC12.56□□□□□ -0.4
HMCN2Q8NDA2 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
HMCN2Q8NDA2 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
HMCN2Q8NDA2 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
HMCN2Q8NDA2 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
HMCN2Q8NDA2 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC12.56□□□□□ -0.4
HMCN2Q8NDA2 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HMCN2Q8NDA2 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
HMCN2Q8NDA2 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
HMCN2Q8NDA2 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC12.56□□□□□ -0.4
HMCN2Q8NDA2 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
HMCN2Q8NDA2 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC12.56□□□□□ -0.4
HMCN2Q8NDA2 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HMCN2Q8NDA2 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HMCN2Q8NDA2 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HMCN2Q8NDA2 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC12.56□□□□□ -0.4
HMCN2Q8NDA2 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
HMCN2Q8NDA2 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC12.56□□□□□ -0.4
HMCN2Q8NDA2 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC12.56□□□□□ -0.4
HMCN2Q8NDA2 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HMCN2Q8NDA2 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC12.55□□□□□ -0.4
HMCN2Q8NDA2 TSPY15P-201ENST00000457163 923 ntBASIC12.55□□□□□ -0.4
HMCN2Q8NDA2 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HMCN2Q8NDA2 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
HMCN2Q8NDA2 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
HMCN2Q8NDA2 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC12.55□□□□□ -0.4
HMCN2Q8NDA2 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HMCN2Q8NDA2 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
HMCN2Q8NDA2 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC12.55□□□□□ -0.4
HMCN2Q8NDA2 RN7SL850P-201ENST00000579959 291 ntBASIC12.55□□□□□ -0.4
HMCN2Q8NDA2 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC12.55□□□□□ -0.4
HMCN2Q8NDA2 AL121894.2-201ENST00000602977 491 ntBASIC12.55□□□□□ -0.4
HMCN2Q8NDA2 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HMCN2Q8NDA2 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC12.55□□□□□ -0.4
HMCN2Q8NDA2 AL359736.2-201ENST00000621992 437 ntBASIC12.55□□□□□ -0.4
HMCN2Q8NDA2 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
HMCN2Q8NDA2 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
HMCN2Q8NDA2 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
HMCN2Q8NDA2 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms