Protein–RNA interactions for Protein: Q8N6N2

TTC9B, Tetratricopeptide repeat protein 9B, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9BQ8N6N2 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
TTC9BQ8N6N2 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC23.2■■□□□ 1.3
TTC9BQ8N6N2 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC23.2■■□□□ 1.3
TTC9BQ8N6N2 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TTC9BQ8N6N2 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC23.2■■□□□ 1.3
TTC9BQ8N6N2 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC23.2■■□□□ 1.3
TTC9BQ8N6N2 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TTC9BQ8N6N2 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC23.2■■□□□ 1.3
TTC9BQ8N6N2 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TTC9BQ8N6N2 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC23.2■■□□□ 1.3
TTC9BQ8N6N2 NT5C3AP1-201ENST00000394500 1012 ntBASIC23.2■■□□□ 1.3
TTC9BQ8N6N2 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC23.2■■□□□ 1.3
TTC9BQ8N6N2 GLI3-203ENST00000437480 451 ntTSL 2 BASIC23.2■■□□□ 1.3
TTC9BQ8N6N2 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC23.2■■□□□ 1.3
TTC9BQ8N6N2 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC23.2■■□□□ 1.3
TTC9BQ8N6N2 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC23.2■■□□□ 1.3
TTC9BQ8N6N2 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC23.2■■□□□ 1.3
TTC9BQ8N6N2 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC23.2■■□□□ 1.3
TTC9BQ8N6N2 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TTC9BQ8N6N2 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC23.2■■□□□ 1.3
TTC9BQ8N6N2 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
TTC9BQ8N6N2 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
TTC9BQ8N6N2 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC23.19■■□□□ 1.3
TTC9BQ8N6N2 AC092068.2-201ENST00000590491 1708 ntBASIC23.19■■□□□ 1.3
TTC9BQ8N6N2 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.19■■□□□ 1.3
TTC9BQ8N6N2 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
TTC9BQ8N6N2 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
TTC9BQ8N6N2 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC23.19■■□□□ 1.3
TTC9BQ8N6N2 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
TTC9BQ8N6N2 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TTC9BQ8N6N2 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
TTC9BQ8N6N2 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC23.19■■□□□ 1.3
TTC9BQ8N6N2 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC23.18■■□□□ 1.3
TTC9BQ8N6N2 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
TTC9BQ8N6N2 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC23.18■■□□□ 1.3
TTC9BQ8N6N2 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TTC9BQ8N6N2 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC23.18■■□□□ 1.3
TTC9BQ8N6N2 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TTC9BQ8N6N2 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TTC9BQ8N6N2 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TTC9BQ8N6N2 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TTC9BQ8N6N2 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TTC9BQ8N6N2 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC23.18■■□□□ 1.3
TTC9BQ8N6N2 IKBKGP1-201ENST00000612193 1073 ntBASIC23.18■■□□□ 1.3
TTC9BQ8N6N2 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TTC9BQ8N6N2 AC093323.1-202ENST00000635031 2045 ntBASIC23.18■■□□□ 1.3
TTC9BQ8N6N2 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC23.17■■□□□ 1.3
TTC9BQ8N6N2 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TTC9BQ8N6N2 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TTC9BQ8N6N2 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
TTC9BQ8N6N2 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
TTC9BQ8N6N2 MPST-204ENST00000404393 1329 ntTSL 5 BASIC23.17■■□□□ 1.3
TTC9BQ8N6N2 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TTC9BQ8N6N2 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
TTC9BQ8N6N2 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC23.17■■□□□ 1.3
TTC9BQ8N6N2 TERF1P2-201ENST00000583350 1212 ntBASIC23.17■■□□□ 1.3
TTC9BQ8N6N2 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
TTC9BQ8N6N2 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
TTC9BQ8N6N2 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
TTC9BQ8N6N2 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TTC9BQ8N6N2 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TTC9BQ8N6N2 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TTC9BQ8N6N2 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TTC9BQ8N6N2 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TTC9BQ8N6N2 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TTC9BQ8N6N2 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC23.16■■□□□ 1.3
TTC9BQ8N6N2 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
TTC9BQ8N6N2 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
TTC9BQ8N6N2 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
TTC9BQ8N6N2 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC23.16■■□□□ 1.3
TTC9BQ8N6N2 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
TTC9BQ8N6N2 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TTC9BQ8N6N2 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC23.16■■□□□ 1.3
TTC9BQ8N6N2 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
TTC9BQ8N6N2 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TTC9BQ8N6N2 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TTC9BQ8N6N2 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TTC9BQ8N6N2 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC23.15■■□□□ 1.3
TTC9BQ8N6N2 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC23.15■■□□□ 1.3
TTC9BQ8N6N2 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC23.15■■□□□ 1.3
TTC9BQ8N6N2 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TTC9BQ8N6N2 KRT18P14-201ENST00000534205 1250 ntBASIC23.15■■□□□ 1.3
TTC9BQ8N6N2 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
TTC9BQ8N6N2 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
TTC9BQ8N6N2 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TTC9BQ8N6N2 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
TTC9BQ8N6N2 LINC02228-203ENST00000641970 1355 ntBASIC23.14■■□□□ 1.3
TTC9BQ8N6N2 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
TTC9BQ8N6N2 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
TTC9BQ8N6N2 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC23.14■■□□□ 1.3
TTC9BQ8N6N2 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
TTC9BQ8N6N2 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC23.14■■□□□ 1.29
TTC9BQ8N6N2 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
TTC9BQ8N6N2 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
TTC9BQ8N6N2 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
TTC9BQ8N6N2 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC23.14■■□□□ 1.29
TTC9BQ8N6N2 AC022517.1-201ENST00000592429 346 ntBASIC23.14■■□□□ 1.29
TTC9BQ8N6N2 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TTC9BQ8N6N2 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
TTC9BQ8N6N2 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms