Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.47■□□□□ 0.71
LRRC28Q86X40 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
LRRC28Q86X40 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRRC28Q86X40 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRRC28Q86X40 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRRC28Q86X40 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRRC28Q86X40 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.47■□□□□ 0.71
LRRC28Q86X40 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.47■□□□□ 0.71
LRRC28Q86X40 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRRC28Q86X40 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRRC28Q86X40 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
LRRC28Q86X40 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRRC28Q86X40 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRRC28Q86X40 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRRC28Q86X40 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
LRRC28Q86X40 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRRC28Q86X40 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRRC28Q86X40 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRRC28Q86X40 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.46■□□□□ 0.71
LRRC28Q86X40 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.46■□□□□ 0.71
LRRC28Q86X40 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
LRRC28Q86X40 UNC93B8-201ENST00000511903 705 ntBASIC19.46■□□□□ 0.71
LRRC28Q86X40 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
LRRC28Q86X40 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.46■□□□□ 0.71
LRRC28Q86X40 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
LRRC28Q86X40 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRRC28Q86X40 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.46■□□□□ 0.71
LRRC28Q86X40 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
LRRC28Q86X40 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.46■□□□□ 0.71
LRRC28Q86X40 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
LRRC28Q86X40 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LRRC28Q86X40 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
LRRC28Q86X40 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.45■□□□□ 0.7
LRRC28Q86X40 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.45■□□□□ 0.7
LRRC28Q86X40 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
LRRC28Q86X40 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LRRC28Q86X40 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
LRRC28Q86X40 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LRRC28Q86X40 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
LRRC28Q86X40 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
LRRC28Q86X40 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.45■□□□□ 0.7
LRRC28Q86X40 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
LRRC28Q86X40 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRRC28Q86X40 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.44■□□□□ 0.7
LRRC28Q86X40 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
LRRC28Q86X40 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.44■□□□□ 0.7
LRRC28Q86X40 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.44■□□□□ 0.7
LRRC28Q86X40 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRRC28Q86X40 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LRRC28Q86X40 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.44■□□□□ 0.7
LRRC28Q86X40 TSPY9P-201ENST00000440215 945 ntBASIC19.44■□□□□ 0.7
LRRC28Q86X40 TSPY11P-201ENST00000442607 1045 ntBASIC19.44■□□□□ 0.7
LRRC28Q86X40 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LRRC28Q86X40 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRRC28Q86X40 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRRC28Q86X40 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
LRRC28Q86X40 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRRC28Q86X40 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRRC28Q86X40 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
LRRC28Q86X40 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.43■□□□□ 0.7
LRRC28Q86X40 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LRRC28Q86X40 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRRC28Q86X40 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.43■□□□□ 0.7
LRRC28Q86X40 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LRRC28Q86X40 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
LRRC28Q86X40 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
LRRC28Q86X40 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LRRC28Q86X40 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
LRRC28Q86X40 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRRC28Q86X40 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.42■□□□□ 0.7
LRRC28Q86X40 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRRC28Q86X40 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRRC28Q86X40 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRRC28Q86X40 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.42■□□□□ 0.7
LRRC28Q86X40 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.42■□□□□ 0.7
LRRC28Q86X40 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.42■□□□□ 0.7
LRRC28Q86X40 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRRC28Q86X40 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LRRC28Q86X40 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.42■□□□□ 0.7
LRRC28Q86X40 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.42■□□□□ 0.7
LRRC28Q86X40 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
LRRC28Q86X40 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
LRRC28Q86X40 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
LRRC28Q86X40 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRRC28Q86X40 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRRC28Q86X40 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRRC28Q86X40 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
LRRC28Q86X40 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LRRC28Q86X40 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRC28Q86X40 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LRRC28Q86X40 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRC28Q86X40 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRC28Q86X40 AC026310.3-201ENST00000625186 2373 ntBASIC19.41■□□□□ 0.7
LRRC28Q86X40 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRC28Q86X40 AL022069.1-201ENST00000568025 1636 ntBASIC19.41■□□□□ 0.7
LRRC28Q86X40 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRC28Q86X40 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRC28Q86X40 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
LRRC28Q86X40 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.41■□□□□ 0.7
LRRC28Q86X40 KRT16P3-201ENST00000439127 1283 ntBASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms