Protein–RNA interactions for Protein: Q86UF4

CCDC190, Coiled-coil domain-containing protein 190, humanhuman

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC190Q86UF4 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CCDC190Q86UF4 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC190Q86UF4 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC190Q86UF4 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC190Q86UF4 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC190Q86UF4 AL162393.1-201ENST00000437852 946 ntBASIC19.17■□□□□ 0.66
CCDC190Q86UF4 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC190Q86UF4 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC190Q86UF4 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC190Q86UF4 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC190Q86UF4 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC190Q86UF4 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC190Q86UF4 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC19.16■□□□□ 0.66
CCDC190Q86UF4 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC190Q86UF4 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC190Q86UF4 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC190Q86UF4 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC190Q86UF4 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC190Q86UF4 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC190Q86UF4 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC190Q86UF4 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC190Q86UF4 HGH1-207ENST00000628266 258 ntTSL 5 BASIC19.15■□□□□ 0.66
CCDC190Q86UF4 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC190Q86UF4 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC190Q86UF4 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.15■□□□□ 0.66
CCDC190Q86UF4 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
CCDC190Q86UF4 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC190Q86UF4 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.15■□□□□ 0.66
CCDC190Q86UF4 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC190Q86UF4 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC190Q86UF4 AC131274.2-201ENST00000580697 1507 ntBASIC19.15■□□□□ 0.66
CCDC190Q86UF4 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.15■□□□□ 0.66
CCDC190Q86UF4 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.15■□□□□ 0.66
CCDC190Q86UF4 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CCDC190Q86UF4 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.14■□□□□ 0.66
CCDC190Q86UF4 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.14■□□□□ 0.66
CCDC190Q86UF4 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC190Q86UF4 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC190Q86UF4 RP9P-202ENST00000450133 1212 ntBASIC19.14■□□□□ 0.65
CCDC190Q86UF4 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CCDC190Q86UF4 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC190Q86UF4 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
CCDC190Q86UF4 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC190Q86UF4 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC190Q86UF4 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.14■□□□□ 0.65
CCDC190Q86UF4 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.14■□□□□ 0.65
CCDC190Q86UF4 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.13■□□□□ 0.65
CCDC190Q86UF4 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.13■□□□□ 0.65
CCDC190Q86UF4 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC190Q86UF4 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC190Q86UF4 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC190Q86UF4 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.13■□□□□ 0.65
CCDC190Q86UF4 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
CCDC190Q86UF4 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC190Q86UF4 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC190Q86UF4 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC190Q86UF4 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.13■□□□□ 0.65
CCDC190Q86UF4 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC190Q86UF4 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.13■□□□□ 0.65
CCDC190Q86UF4 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.13■□□□□ 0.65
CCDC190Q86UF4 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CCDC190Q86UF4 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC190Q86UF4 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC190Q86UF4 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC190Q86UF4 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC190Q86UF4 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC190Q86UF4 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC190Q86UF4 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC190Q86UF4 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CCDC190Q86UF4 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC190Q86UF4 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC19.12■□□□□ 0.65
CCDC190Q86UF4 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC190Q86UF4 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC190Q86UF4 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC190Q86UF4 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC190Q86UF4 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.12■□□□□ 0.65
CCDC190Q86UF4 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC190Q86UF4 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC190Q86UF4 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC190Q86UF4 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC190Q86UF4 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC19.11■□□□□ 0.65
CCDC190Q86UF4 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC190Q86UF4 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC190Q86UF4 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CCDC190Q86UF4 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.11■□□□□ 0.65
CCDC190Q86UF4 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC190Q86UF4 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC19.11■□□□□ 0.65
CCDC190Q86UF4 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC190Q86UF4 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
CCDC190Q86UF4 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
CCDC190Q86UF4 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC190Q86UF4 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC190Q86UF4 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CCDC190Q86UF4 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC190Q86UF4 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.1■□□□□ 0.65
CCDC190Q86UF4 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
CCDC190Q86UF4 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC190Q86UF4 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC190Q86UF4 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC190Q86UF4 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms