Protein–RNA interactions for Protein: Q86TM6

SYVN1, E3 ubiquitin-protein ligase synoviolin, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1Q86TM6 AC127496.7-201ENST00000625110 1798 ntBASIC21.58■■□□□ 1.04
SYVN1Q86TM6 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
SYVN1Q86TM6 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
SYVN1Q86TM6 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.58■■□□□ 1.04
SYVN1Q86TM6 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SYVN1Q86TM6 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
SYVN1Q86TM6 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
SYVN1Q86TM6 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SYVN1Q86TM6 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.57■■□□□ 1.04
SYVN1Q86TM6 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SYVN1Q86TM6 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SYVN1Q86TM6 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SYVN1Q86TM6 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.57■■□□□ 1.04
SYVN1Q86TM6 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SYVN1Q86TM6 AC242852.2-201ENST00000615738 1807 ntBASIC21.57■■□□□ 1.04
SYVN1Q86TM6 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.57■■□□□ 1.04
SYVN1Q86TM6 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SYVN1Q86TM6 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.57■■□□□ 1.04
SYVN1Q86TM6 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SYVN1Q86TM6 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.56■■□□□ 1.04
SYVN1Q86TM6 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SYVN1Q86TM6 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SYVN1Q86TM6 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SYVN1Q86TM6 EDA-201ENST00000338901 1233 ntBASIC21.56■■□□□ 1.04
SYVN1Q86TM6 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SYVN1Q86TM6 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC21.56■■□□□ 1.04
SYVN1Q86TM6 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.56■■□□□ 1.04
SYVN1Q86TM6 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SYVN1Q86TM6 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.56■■□□□ 1.04
SYVN1Q86TM6 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SYVN1Q86TM6 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SYVN1Q86TM6 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SYVN1Q86TM6 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
SYVN1Q86TM6 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SYVN1Q86TM6 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.55■■□□□ 1.04
SYVN1Q86TM6 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.55■■□□□ 1.04
SYVN1Q86TM6 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SYVN1Q86TM6 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SYVN1Q86TM6 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SYVN1Q86TM6 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.55■■□□□ 1.04
SYVN1Q86TM6 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.55■■□□□ 1.04
SYVN1Q86TM6 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.55■■□□□ 1.04
SYVN1Q86TM6 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SYVN1Q86TM6 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.55■■□□□ 1.04
SYVN1Q86TM6 AC092171.4-201ENST00000609130 632 ntBASIC21.55■■□□□ 1.04
SYVN1Q86TM6 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SYVN1Q86TM6 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SYVN1Q86TM6 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
SYVN1Q86TM6 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SYVN1Q86TM6 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SYVN1Q86TM6 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SYVN1Q86TM6 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SYVN1Q86TM6 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.55■■□□□ 1.04
SYVN1Q86TM6 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.55■■□□□ 1.04
SYVN1Q86TM6 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
SYVN1Q86TM6 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.54■■□□□ 1.04
SYVN1Q86TM6 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SYVN1Q86TM6 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.54■■□□□ 1.04
SYVN1Q86TM6 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.54■■□□□ 1.04
SYVN1Q86TM6 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.54■■□□□ 1.04
SYVN1Q86TM6 SUDS3P1-201ENST00000505831 966 ntBASIC21.54■■□□□ 1.04
SYVN1Q86TM6 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.54■■□□□ 1.04
SYVN1Q86TM6 AC024257.2-201ENST00000549699 147 ntBASIC21.54■■□□□ 1.04
SYVN1Q86TM6 AL031432.3-201ENST00000607698 485 ntBASIC21.54■■□□□ 1.04
SYVN1Q86TM6 AL355001.2-201ENST00000620617 1191 ntBASIC21.54■■□□□ 1.04
SYVN1Q86TM6 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SYVN1Q86TM6 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SYVN1Q86TM6 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.54■■□□□ 1.04
SYVN1Q86TM6 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
SYVN1Q86TM6 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SYVN1Q86TM6 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
SYVN1Q86TM6 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
SYVN1Q86TM6 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.53■■□□□ 1.04
SYVN1Q86TM6 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SYVN1Q86TM6 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
SYVN1Q86TM6 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.53■■□□□ 1.04
SYVN1Q86TM6 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SYVN1Q86TM6 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SYVN1Q86TM6 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
SYVN1Q86TM6 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.53■■□□□ 1.04
SYVN1Q86TM6 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SYVN1Q86TM6 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SYVN1Q86TM6 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SYVN1Q86TM6 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SYVN1Q86TM6 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SYVN1Q86TM6 LINC01529-204ENST00000636474 1715 ntBASIC21.52■■□□□ 1.04
SYVN1Q86TM6 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SYVN1Q86TM6 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.52■■□□□ 1.04
SYVN1Q86TM6 CLDN5-201ENST00000403084 2357 ntBASIC21.52■■□□□ 1.04
SYVN1Q86TM6 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.52■■□□□ 1.04
SYVN1Q86TM6 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SYVN1Q86TM6 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
SYVN1Q86TM6 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
SYVN1Q86TM6 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SYVN1Q86TM6 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
SYVN1Q86TM6 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
SYVN1Q86TM6 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
SYVN1Q86TM6 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SYVN1Q86TM6 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.51■■□□□ 1.03
SYVN1Q86TM6 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms