Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LCA10Q71F78 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
LCA10Q71F78 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LCA10Q71F78 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
LCA10Q71F78 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.52
LCA10Q71F78 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
LCA10Q71F78 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
LCA10Q71F78 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC11.77□□□□□ -0.52
LCA10Q71F78 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
LCA10Q71F78 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
LCA10Q71F78 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
LCA10Q71F78 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC11.77□□□□□ -0.53
LCA10Q71F78 AGPS-202ENST00000409888 815 ntTSL 4 BASIC11.77□□□□□ -0.53
LCA10Q71F78 MLEC-202ENST00000412616 841 ntTSL 3 BASIC11.77□□□□□ -0.53
LCA10Q71F78 ZNRF2P2-203ENST00000454624 420 ntBASIC11.77□□□□□ -0.53
LCA10Q71F78 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC11.77□□□□□ -0.53
LCA10Q71F78 RNF166-209ENST00000567844 633 ntTSL 5 BASIC11.77□□□□□ -0.53
LCA10Q71F78 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC11.77□□□□□ -0.53
LCA10Q71F78 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
LCA10Q71F78 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
LCA10Q71F78 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
LCA10Q71F78 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
LCA10Q71F78 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
LCA10Q71F78 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
LCA10Q71F78 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC11.77□□□□□ -0.53
LCA10Q71F78 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
LCA10Q71F78 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
LCA10Q71F78 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
LCA10Q71F78 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
LCA10Q71F78 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
LCA10Q71F78 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC11.77□□□□□ -0.53
LCA10Q71F78 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LCA10Q71F78 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LCA10Q71F78 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
LCA10Q71F78 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LCA10Q71F78 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
LCA10Q71F78 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC11.76□□□□□ -0.53
LCA10Q71F78 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LCA10Q71F78 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC11.76□□□□□ -0.53
LCA10Q71F78 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC11.76□□□□□ -0.53
LCA10Q71F78 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
LCA10Q71F78 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
LCA10Q71F78 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LCA10Q71F78 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LCA10Q71F78 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LCA10Q71F78 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LCA10Q71F78 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LCA10Q71F78 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
LCA10Q71F78 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LCA10Q71F78 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LCA10Q71F78 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LCA10Q71F78 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC11.76□□□□□ -0.53
LCA10Q71F78 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
LCA10Q71F78 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
LCA10Q71F78 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
LCA10Q71F78 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
LCA10Q71F78 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LCA10Q71F78 SLC6A10P-202ENST00000431994 2058 ntBASIC11.75□□□□□ -0.53
LCA10Q71F78 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
LCA10Q71F78 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LCA10Q71F78 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
LCA10Q71F78 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
LCA10Q71F78 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LCA10Q71F78 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LCA10Q71F78 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC11.75□□□□□ -0.53
LCA10Q71F78 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
LCA10Q71F78 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
LCA10Q71F78 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LCA10Q71F78 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LCA10Q71F78 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
LCA10Q71F78 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC11.75□□□□□ -0.53
LCA10Q71F78 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC11.75□□□□□ -0.53
LCA10Q71F78 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
LCA10Q71F78 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
LCA10Q71F78 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
LCA10Q71F78 WAC-202ENST00000347934 2839 ntTSL 5 BASIC11.75□□□□□ -0.53
LCA10Q71F78 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
LCA10Q71F78 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
LCA10Q71F78 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC11.75□□□□□ -0.53
LCA10Q71F78 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC11.75□□□□□ -0.53
LCA10Q71F78 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
LCA10Q71F78 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LCA10Q71F78 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LCA10Q71F78 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
LCA10Q71F78 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
LCA10Q71F78 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
LCA10Q71F78 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
LCA10Q71F78 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LCA10Q71F78 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
LCA10Q71F78 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
LCA10Q71F78 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
LCA10Q71F78 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
LCA10Q71F78 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LCA10Q71F78 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LCA10Q71F78 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LCA10Q71F78 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LCA10Q71F78 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
LCA10Q71F78 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
LCA10Q71F78 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
LCA10Q71F78 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms