Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RAPH1Q70E73 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
RAPH1Q70E73 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC22■■□□□ 1.11
RAPH1Q70E73 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RAPH1Q70E73 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC22■■□□□ 1.11
RAPH1Q70E73 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC22■■□□□ 1.11
RAPH1Q70E73 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC22■■□□□ 1.11
RAPH1Q70E73 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC22■■□□□ 1.11
RAPH1Q70E73 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
RAPH1Q70E73 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC22■■□□□ 1.11
RAPH1Q70E73 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RAPH1Q70E73 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.99■■□□□ 1.11
RAPH1Q70E73 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RAPH1Q70E73 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RAPH1Q70E73 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
RAPH1Q70E73 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RAPH1Q70E73 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
RAPH1Q70E73 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.99■■□□□ 1.11
RAPH1Q70E73 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
RAPH1Q70E73 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RAPH1Q70E73 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.99■■□□□ 1.11
RAPH1Q70E73 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RAPH1Q70E73 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
RAPH1Q70E73 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
RAPH1Q70E73 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
RAPH1Q70E73 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
RAPH1Q70E73 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
RAPH1Q70E73 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RAPH1Q70E73 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RAPH1Q70E73 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RAPH1Q70E73 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
RAPH1Q70E73 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC21.98■■□□□ 1.11
RAPH1Q70E73 KRT125P-201ENST00000546827 989 ntBASIC21.98■■□□□ 1.11
RAPH1Q70E73 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.98■■□□□ 1.11
RAPH1Q70E73 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RAPH1Q70E73 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
RAPH1Q70E73 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.98■■□□□ 1.11
RAPH1Q70E73 FP325331.1-202ENST00000623531 1380 ntBASIC21.98■■□□□ 1.11
RAPH1Q70E73 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
RAPH1Q70E73 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RAPH1Q70E73 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
RAPH1Q70E73 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RAPH1Q70E73 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RAPH1Q70E73 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RAPH1Q70E73 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RAPH1Q70E73 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.97■■□□□ 1.11
RAPH1Q70E73 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RAPH1Q70E73 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.97■■□□□ 1.11
RAPH1Q70E73 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.97■■□□□ 1.11
RAPH1Q70E73 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
RAPH1Q70E73 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
RAPH1Q70E73 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.97■■□□□ 1.11
RAPH1Q70E73 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.97■■□□□ 1.11
RAPH1Q70E73 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RAPH1Q70E73 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.96■■□□□ 1.11
RAPH1Q70E73 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
RAPH1Q70E73 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RAPH1Q70E73 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
RAPH1Q70E73 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.96■■□□□ 1.11
RAPH1Q70E73 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
RAPH1Q70E73 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.96■■□□□ 1.11
RAPH1Q70E73 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.96■■□□□ 1.11
RAPH1Q70E73 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.96■■□□□ 1.11
RAPH1Q70E73 AC092028.1-203ENST00000608262 953 ntBASIC21.96■■□□□ 1.11
RAPH1Q70E73 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RAPH1Q70E73 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.96■■□□□ 1.11
RAPH1Q70E73 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
RAPH1Q70E73 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RAPH1Q70E73 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RAPH1Q70E73 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.96■■□□□ 1.11
RAPH1Q70E73 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
RAPH1Q70E73 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.95■■□□□ 1.1
RAPH1Q70E73 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
RAPH1Q70E73 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
RAPH1Q70E73 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RAPH1Q70E73 AC137767.1-201ENST00000602918 1920 ntBASIC21.95■■□□□ 1.1
RAPH1Q70E73 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RAPH1Q70E73 AC080038.3-201ENST00000623346 1952 ntBASIC21.95■■□□□ 1.1
RAPH1Q70E73 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RAPH1Q70E73 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
RAPH1Q70E73 AC087742.1-201ENST00000575880 1738 ntBASIC21.94■■□□□ 1.1
RAPH1Q70E73 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RAPH1Q70E73 AC092053.2-201ENST00000640557 1818 ntBASIC21.94■■□□□ 1.1
RAPH1Q70E73 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RAPH1Q70E73 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RAPH1Q70E73 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.94■■□□□ 1.1
RAPH1Q70E73 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
RAPH1Q70E73 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.94■■□□□ 1.1
RAPH1Q70E73 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RAPH1Q70E73 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RAPH1Q70E73 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RAPH1Q70E73 AC139530.1-201ENST00000575312 1977 ntBASIC21.94■■□□□ 1.1
RAPH1Q70E73 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
RAPH1Q70E73 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.94■■□□□ 1.1
RAPH1Q70E73 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RAPH1Q70E73 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RAPH1Q70E73 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.94■■□□□ 1.1
RAPH1Q70E73 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.94■■□□□ 1.1
RAPH1Q70E73 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RAPH1Q70E73 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms