Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
NHLRC1Q6VVB1 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NHLRC1Q6VVB1 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
NHLRC1Q6VVB1 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NHLRC1Q6VVB1 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
NHLRC1Q6VVB1 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NHLRC1Q6VVB1 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.71■□□□□ 0.75
NHLRC1Q6VVB1 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NHLRC1Q6VVB1 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.71■□□□□ 0.75
NHLRC1Q6VVB1 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.71■□□□□ 0.75
NHLRC1Q6VVB1 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.71■□□□□ 0.75
NHLRC1Q6VVB1 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NHLRC1Q6VVB1 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.71■□□□□ 0.75
NHLRC1Q6VVB1 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.71■□□□□ 0.75
NHLRC1Q6VVB1 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NHLRC1Q6VVB1 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
NHLRC1Q6VVB1 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
NHLRC1Q6VVB1 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
NHLRC1Q6VVB1 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NHLRC1Q6VVB1 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NHLRC1Q6VVB1 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NHLRC1Q6VVB1 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
NHLRC1Q6VVB1 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NHLRC1Q6VVB1 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NHLRC1Q6VVB1 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NHLRC1Q6VVB1 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NHLRC1Q6VVB1 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.7■□□□□ 0.74
NHLRC1Q6VVB1 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.7■□□□□ 0.74
NHLRC1Q6VVB1 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NHLRC1Q6VVB1 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.7■□□□□ 0.74
NHLRC1Q6VVB1 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.7■□□□□ 0.74
NHLRC1Q6VVB1 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.7■□□□□ 0.74
NHLRC1Q6VVB1 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.7■□□□□ 0.74
NHLRC1Q6VVB1 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NHLRC1Q6VVB1 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NHLRC1Q6VVB1 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NHLRC1Q6VVB1 AC087742.1-201ENST00000575880 1738 ntBASIC19.7■□□□□ 0.74
NHLRC1Q6VVB1 ESRRAP2-201ENST00000418437 1549 ntBASIC19.7■□□□□ 0.74
NHLRC1Q6VVB1 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NHLRC1Q6VVB1 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NHLRC1Q6VVB1 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.69■□□□□ 0.74
NHLRC1Q6VVB1 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NHLRC1Q6VVB1 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NHLRC1Q6VVB1 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NHLRC1Q6VVB1 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NHLRC1Q6VVB1 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NHLRC1Q6VVB1 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.69■□□□□ 0.74
NHLRC1Q6VVB1 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NHLRC1Q6VVB1 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
NHLRC1Q6VVB1 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NHLRC1Q6VVB1 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NHLRC1Q6VVB1 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NHLRC1Q6VVB1 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
NHLRC1Q6VVB1 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
NHLRC1Q6VVB1 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NHLRC1Q6VVB1 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NHLRC1Q6VVB1 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NHLRC1Q6VVB1 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.68■□□□□ 0.74
NHLRC1Q6VVB1 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NHLRC1Q6VVB1 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NHLRC1Q6VVB1 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
NHLRC1Q6VVB1 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
NHLRC1Q6VVB1 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.68■□□□□ 0.74
NHLRC1Q6VVB1 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.68■□□□□ 0.74
NHLRC1Q6VVB1 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.68■□□□□ 0.74
NHLRC1Q6VVB1 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.67■□□□□ 0.74
NHLRC1Q6VVB1 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
NHLRC1Q6VVB1 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NHLRC1Q6VVB1 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
NHLRC1Q6VVB1 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NHLRC1Q6VVB1 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NHLRC1Q6VVB1 SRD5A1P1-201ENST00000442297 786 ntBASIC19.67■□□□□ 0.74
NHLRC1Q6VVB1 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.67■□□□□ 0.74
NHLRC1Q6VVB1 MIR3181-201ENST00000578512 73 ntBASIC19.67■□□□□ 0.74
NHLRC1Q6VVB1 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
NHLRC1Q6VVB1 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
NHLRC1Q6VVB1 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NHLRC1Q6VVB1 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NHLRC1Q6VVB1 AL024507.2-201ENST00000606070 2574 ntBASIC19.67■□□□□ 0.74
NHLRC1Q6VVB1 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
NHLRC1Q6VVB1 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NHLRC1Q6VVB1 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
NHLRC1Q6VVB1 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
NHLRC1Q6VVB1 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
NHLRC1Q6VVB1 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NHLRC1Q6VVB1 AC004687.1-201ENST00000579003 1625 ntBASIC19.66■□□□□ 0.74
NHLRC1Q6VVB1 AC233723.2-201ENST00000623798 2106 ntBASIC19.66■□□□□ 0.74
NHLRC1Q6VVB1 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NHLRC1Q6VVB1 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NHLRC1Q6VVB1 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NHLRC1Q6VVB1 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.66■□□□□ 0.74
NHLRC1Q6VVB1 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NHLRC1Q6VVB1 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
NHLRC1Q6VVB1 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
NHLRC1Q6VVB1 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NHLRC1Q6VVB1 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NHLRC1Q6VVB1 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
NHLRC1Q6VVB1 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NHLRC1Q6VVB1 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NHLRC1Q6VVB1 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms