Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
H3F3CQ6NXT2 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
H3F3CQ6NXT2 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
H3F3CQ6NXT2 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
H3F3CQ6NXT2 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
H3F3CQ6NXT2 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
H3F3CQ6NXT2 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
H3F3CQ6NXT2 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
H3F3CQ6NXT2 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
H3F3CQ6NXT2 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
H3F3CQ6NXT2 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.33■□□□□ 0.85
H3F3CQ6NXT2 AL162430.1-201ENST00000480705 870 ntBASIC20.33■□□□□ 0.85
H3F3CQ6NXT2 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
H3F3CQ6NXT2 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.33■□□□□ 0.85
H3F3CQ6NXT2 AC092666.2-201ENST00000613287 246 ntBASIC20.33■□□□□ 0.85
H3F3CQ6NXT2 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
H3F3CQ6NXT2 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
H3F3CQ6NXT2 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.33■□□□□ 0.84
H3F3CQ6NXT2 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
H3F3CQ6NXT2 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.32■□□□□ 0.84
H3F3CQ6NXT2 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
H3F3CQ6NXT2 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.32■□□□□ 0.84
H3F3CQ6NXT2 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.32■□□□□ 0.84
H3F3CQ6NXT2 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.32■□□□□ 0.84
H3F3CQ6NXT2 AC034268.1-201ENST00000441047 882 ntBASIC20.32■□□□□ 0.84
H3F3CQ6NXT2 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
H3F3CQ6NXT2 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.32■□□□□ 0.84
H3F3CQ6NXT2 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.32■□□□□ 0.84
H3F3CQ6NXT2 AL031602.1-201ENST00000633169 911 ntBASIC20.32■□□□□ 0.84
H3F3CQ6NXT2 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
H3F3CQ6NXT2 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
H3F3CQ6NXT2 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
H3F3CQ6NXT2 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
H3F3CQ6NXT2 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.32■□□□□ 0.84
H3F3CQ6NXT2 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.31■□□□□ 0.84
H3F3CQ6NXT2 AC092068.2-201ENST00000590491 1708 ntBASIC20.31■□□□□ 0.84
H3F3CQ6NXT2 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.31■□□□□ 0.84
H3F3CQ6NXT2 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
H3F3CQ6NXT2 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
H3F3CQ6NXT2 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.31■□□□□ 0.84
H3F3CQ6NXT2 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
H3F3CQ6NXT2 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
H3F3CQ6NXT2 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.31■□□□□ 0.84
H3F3CQ6NXT2 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.31■□□□□ 0.84
H3F3CQ6NXT2 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.31■□□□□ 0.84
H3F3CQ6NXT2 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.3■□□□□ 0.84
H3F3CQ6NXT2 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.3■□□□□ 0.84
H3F3CQ6NXT2 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.3■□□□□ 0.84
H3F3CQ6NXT2 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.3■□□□□ 0.84
H3F3CQ6NXT2 MIR6084-201ENST00000622012 110 ntBASIC20.3■□□□□ 0.84
H3F3CQ6NXT2 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
H3F3CQ6NXT2 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
H3F3CQ6NXT2 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
H3F3CQ6NXT2 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
H3F3CQ6NXT2 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.3■□□□□ 0.84
H3F3CQ6NXT2 ANOS2P-203ENST00000472227 1816 ntBASIC20.3■□□□□ 0.84
H3F3CQ6NXT2 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.29■□□□□ 0.84
H3F3CQ6NXT2 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
H3F3CQ6NXT2 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
H3F3CQ6NXT2 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.29■□□□□ 0.84
H3F3CQ6NXT2 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.29■□□□□ 0.84
H3F3CQ6NXT2 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
H3F3CQ6NXT2 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
H3F3CQ6NXT2 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
H3F3CQ6NXT2 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
H3F3CQ6NXT2 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
H3F3CQ6NXT2 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
H3F3CQ6NXT2 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.29■□□□□ 0.84
H3F3CQ6NXT2 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.29■□□□□ 0.84
H3F3CQ6NXT2 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.29■□□□□ 0.84
H3F3CQ6NXT2 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.29■□□□□ 0.84
H3F3CQ6NXT2 AC105233.4-201ENST00000642045 216 ntBASIC20.29■□□□□ 0.84
H3F3CQ6NXT2 AC133561.1-201ENST00000568600 2415 ntBASIC20.29■□□□□ 0.84
H3F3CQ6NXT2 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.29■□□□□ 0.84
H3F3CQ6NXT2 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.29■□□□□ 0.84
H3F3CQ6NXT2 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
H3F3CQ6NXT2 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
H3F3CQ6NXT2 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
H3F3CQ6NXT2 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.29■□□□□ 0.84
H3F3CQ6NXT2 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.28■□□□□ 0.84
H3F3CQ6NXT2 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
H3F3CQ6NXT2 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
H3F3CQ6NXT2 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.28■□□□□ 0.84
H3F3CQ6NXT2 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
H3F3CQ6NXT2 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
H3F3CQ6NXT2 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
H3F3CQ6NXT2 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
H3F3CQ6NXT2 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
H3F3CQ6NXT2 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.28■□□□□ 0.84
H3F3CQ6NXT2 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.28■□□□□ 0.84
H3F3CQ6NXT2 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.28■□□□□ 0.84
H3F3CQ6NXT2 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.28■□□□□ 0.84
H3F3CQ6NXT2 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
H3F3CQ6NXT2 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
H3F3CQ6NXT2 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
H3F3CQ6NXT2 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
H3F3CQ6NXT2 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
H3F3CQ6NXT2 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
H3F3CQ6NXT2 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
H3F3CQ6NXT2 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms