Protein–RNA interactions for Protein: Q3SXY7

LRIT3, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3Q3SXY7 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
LRIT3Q3SXY7 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC23.89■■□□□ 1.41
LRIT3Q3SXY7 FP325331.1-202ENST00000623531 1380 ntBASIC23.89■■□□□ 1.41
LRIT3Q3SXY7 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
LRIT3Q3SXY7 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC23.88■■□□□ 1.41
LRIT3Q3SXY7 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC23.88■■□□□ 1.41
LRIT3Q3SXY7 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
LRIT3Q3SXY7 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
LRIT3Q3SXY7 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
LRIT3Q3SXY7 FAM210CP-201ENST00000445714 574 ntBASIC23.88■■□□□ 1.41
LRIT3Q3SXY7 AL158047.1-201ENST00000445918 881 ntBASIC23.88■■□□□ 1.41
LRIT3Q3SXY7 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC23.88■■□□□ 1.41
LRIT3Q3SXY7 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC23.88■■□□□ 1.41
LRIT3Q3SXY7 AC142381.4-202ENST00000563973 229 ntBASIC23.88■■□□□ 1.41
LRIT3Q3SXY7 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
LRIT3Q3SXY7 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
LRIT3Q3SXY7 MIR6089-201ENST00000616698 64 ntBASIC23.88■■□□□ 1.41
LRIT3Q3SXY7 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
LRIT3Q3SXY7 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
LRIT3Q3SXY7 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
LRIT3Q3SXY7 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
LRIT3Q3SXY7 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC23.87■■□□□ 1.41
LRIT3Q3SXY7 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC23.87■■□□□ 1.41
LRIT3Q3SXY7 RARRES2P4-201ENST00000514074 484 ntBASIC23.87■■□□□ 1.41
LRIT3Q3SXY7 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC23.87■■□□□ 1.41
LRIT3Q3SXY7 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
LRIT3Q3SXY7 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC23.86■■□□□ 1.41
LRIT3Q3SXY7 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
LRIT3Q3SXY7 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
LRIT3Q3SXY7 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC23.86■■□□□ 1.41
LRIT3Q3SXY7 UBE2DNL-204ENST00000602536 740 ntBASIC23.86■■□□□ 1.41
LRIT3Q3SXY7 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
LRIT3Q3SXY7 ALDH1A3-203ENST00000557963 1670 ntBASIC23.86■■□□□ 1.41
LRIT3Q3SXY7 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
LRIT3Q3SXY7 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
LRIT3Q3SXY7 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
LRIT3Q3SXY7 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC23.85■■□□□ 1.41
LRIT3Q3SXY7 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC23.85■■□□□ 1.41
LRIT3Q3SXY7 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC23.85■■□□□ 1.41
LRIT3Q3SXY7 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
LRIT3Q3SXY7 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
LRIT3Q3SXY7 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
LRIT3Q3SXY7 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
LRIT3Q3SXY7 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC23.84■■□□□ 1.41
LRIT3Q3SXY7 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
LRIT3Q3SXY7 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
LRIT3Q3SXY7 ESRRAP1-201ENST00000400596 1257 ntBASIC23.84■■□□□ 1.41
LRIT3Q3SXY7 PPP1R14BP2-201ENST00000426284 444 ntBASIC23.84■■□□□ 1.41
LRIT3Q3SXY7 CNN2P6-201ENST00000439038 900 ntBASIC23.84■■□□□ 1.41
LRIT3Q3SXY7 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC23.84■■□□□ 1.41
LRIT3Q3SXY7 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
LRIT3Q3SXY7 AC010331.1-201ENST00000611423 582 ntBASIC23.84■■□□□ 1.41
LRIT3Q3SXY7 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
LRIT3Q3SXY7 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC23.84■■□□□ 1.41
LRIT3Q3SXY7 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
LRIT3Q3SXY7 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
LRIT3Q3SXY7 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
LRIT3Q3SXY7 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC23.83■■□□□ 1.41
LRIT3Q3SXY7 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
LRIT3Q3SXY7 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC23.83■■□□□ 1.41
LRIT3Q3SXY7 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC23.83■■□□□ 1.41
LRIT3Q3SXY7 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC23.83■■□□□ 1.41
LRIT3Q3SXY7 AC104187.1-201ENST00000607510 612 ntBASIC23.83■■□□□ 1.41
LRIT3Q3SXY7 AC092118.2-201ENST00000613495 667 ntBASIC23.83■■□□□ 1.41
LRIT3Q3SXY7 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC23.82■■□□□ 1.4
LRIT3Q3SXY7 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
LRIT3Q3SXY7 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC23.82■■□□□ 1.4
LRIT3Q3SXY7 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC23.82■■□□□ 1.4
LRIT3Q3SXY7 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
LRIT3Q3SXY7 APTR-203ENST00000430801 583 ntTSL 5 BASIC23.82■■□□□ 1.4
LRIT3Q3SXY7 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC23.82■■□□□ 1.4
LRIT3Q3SXY7 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
LRIT3Q3SXY7 BRI3-207ENST00000539286 699 ntTSL 2 BASIC23.82■■□□□ 1.4
LRIT3Q3SXY7 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
LRIT3Q3SXY7 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
LRIT3Q3SXY7 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
LRIT3Q3SXY7 MYCNOS-205ENST00000641950 531 ntBASIC23.82■■□□□ 1.4
LRIT3Q3SXY7 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC23.82■■□□□ 1.4
LRIT3Q3SXY7 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC23.82■■□□□ 1.4
LRIT3Q3SXY7 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
LRIT3Q3SXY7 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
LRIT3Q3SXY7 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
LRIT3Q3SXY7 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC23.81■■□□□ 1.4
LRIT3Q3SXY7 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
LRIT3Q3SXY7 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
LRIT3Q3SXY7 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
LRIT3Q3SXY7 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
LRIT3Q3SXY7 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
LRIT3Q3SXY7 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
LRIT3Q3SXY7 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
LRIT3Q3SXY7 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC23.8■■□□□ 1.4
LRIT3Q3SXY7 MIPEPP3-201ENST00000412105 444 ntBASIC23.8■■□□□ 1.4
LRIT3Q3SXY7 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
LRIT3Q3SXY7 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC23.8■■□□□ 1.4
LRIT3Q3SXY7 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC23.8■■□□□ 1.4
LRIT3Q3SXY7 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
LRIT3Q3SXY7 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC23.8■■□□□ 1.4
LRIT3Q3SXY7 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
LRIT3Q3SXY7 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
LRIT3Q3SXY7 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms