Protein–RNA interactions for Protein: Q2M2D7

TBC1D28, TBC1 domain family member 28, humanhuman

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D28Q2M2D7 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.09■□□□□ 0.65
TBC1D28Q2M2D7 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TBC1D28Q2M2D7 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.09■□□□□ 0.65
TBC1D28Q2M2D7 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TBC1D28Q2M2D7 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TBC1D28Q2M2D7 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TBC1D28Q2M2D7 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.09■□□□□ 0.65
TBC1D28Q2M2D7 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TBC1D28Q2M2D7 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.08■□□□□ 0.65
TBC1D28Q2M2D7 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.65
TBC1D28Q2M2D7 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
TBC1D28Q2M2D7 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TBC1D28Q2M2D7 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
TBC1D28Q2M2D7 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.08■□□□□ 0.65
TBC1D28Q2M2D7 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
TBC1D28Q2M2D7 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TBC1D28Q2M2D7 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
TBC1D28Q2M2D7 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TBC1D28Q2M2D7 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.08■□□□□ 0.64
TBC1D28Q2M2D7 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.08■□□□□ 0.64
TBC1D28Q2M2D7 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.08■□□□□ 0.64
TBC1D28Q2M2D7 AC133561.4-201ENST00000566112 224 ntBASIC19.08■□□□□ 0.64
TBC1D28Q2M2D7 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.08■□□□□ 0.64
TBC1D28Q2M2D7 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TBC1D28Q2M2D7 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
TBC1D28Q2M2D7 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TBC1D28Q2M2D7 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TBC1D28Q2M2D7 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
TBC1D28Q2M2D7 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
TBC1D28Q2M2D7 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TBC1D28Q2M2D7 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.07■□□□□ 0.64
TBC1D28Q2M2D7 BX842568.3-201ENST00000418104 571 ntBASIC19.07■□□□□ 0.64
TBC1D28Q2M2D7 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
TBC1D28Q2M2D7 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
TBC1D28Q2M2D7 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.07■□□□□ 0.64
TBC1D28Q2M2D7 AL355001.2-201ENST00000620617 1191 ntBASIC19.07■□□□□ 0.64
TBC1D28Q2M2D7 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.07■□□□□ 0.64
TBC1D28Q2M2D7 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
TBC1D28Q2M2D7 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
TBC1D28Q2M2D7 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
TBC1D28Q2M2D7 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
TBC1D28Q2M2D7 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TBC1D28Q2M2D7 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TBC1D28Q2M2D7 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TBC1D28Q2M2D7 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
TBC1D28Q2M2D7 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TBC1D28Q2M2D7 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TBC1D28Q2M2D7 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.06■□□□□ 0.64
TBC1D28Q2M2D7 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TBC1D28Q2M2D7 SLC47A1P1-202ENST00000449666 945 ntBASIC19.06■□□□□ 0.64
TBC1D28Q2M2D7 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.06■□□□□ 0.64
TBC1D28Q2M2D7 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.06■□□□□ 0.64
TBC1D28Q2M2D7 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.06■□□□□ 0.64
TBC1D28Q2M2D7 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TBC1D28Q2M2D7 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TBC1D28Q2M2D7 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TBC1D28Q2M2D7 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
TBC1D28Q2M2D7 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TBC1D28Q2M2D7 LINC01960-201ENST00000563759 1884 ntBASIC19.05■□□□□ 0.64
TBC1D28Q2M2D7 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.05■□□□□ 0.64
TBC1D28Q2M2D7 C9orf163-202ENST00000624034 2573 ntBASIC19.05■□□□□ 0.64
TBC1D28Q2M2D7 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TBC1D28Q2M2D7 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TBC1D28Q2M2D7 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
TBC1D28Q2M2D7 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TBC1D28Q2M2D7 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
TBC1D28Q2M2D7 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
TBC1D28Q2M2D7 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.05■□□□□ 0.64
TBC1D28Q2M2D7 AC068587.7-201ENST00000641602 218 ntBASIC19.05■□□□□ 0.64
TBC1D28Q2M2D7 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
TBC1D28Q2M2D7 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TBC1D28Q2M2D7 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
TBC1D28Q2M2D7 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TBC1D28Q2M2D7 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TBC1D28Q2M2D7 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TBC1D28Q2M2D7 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TBC1D28Q2M2D7 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TBC1D28Q2M2D7 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TBC1D28Q2M2D7 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.04■□□□□ 0.64
TBC1D28Q2M2D7 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.04■□□□□ 0.64
TBC1D28Q2M2D7 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.04■□□□□ 0.64
TBC1D28Q2M2D7 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.04■□□□□ 0.64
TBC1D28Q2M2D7 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.04■□□□□ 0.64
TBC1D28Q2M2D7 AC027682.1-201ENST00000562846 899 ntBASIC19.04■□□□□ 0.64
TBC1D28Q2M2D7 AC233992.3-201ENST00000607491 485 ntBASIC19.04■□□□□ 0.64
TBC1D28Q2M2D7 AC087239.1-201ENST00000622671 572 ntBASIC19.04■□□□□ 0.64
TBC1D28Q2M2D7 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TBC1D28Q2M2D7 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TBC1D28Q2M2D7 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TBC1D28Q2M2D7 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TBC1D28Q2M2D7 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TBC1D28Q2M2D7 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
TBC1D28Q2M2D7 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.03■□□□□ 0.64
TBC1D28Q2M2D7 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.03■□□□□ 0.64
TBC1D28Q2M2D7 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.03■□□□□ 0.64
TBC1D28Q2M2D7 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TBC1D28Q2M2D7 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.03■□□□□ 0.64
TBC1D28Q2M2D7 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TBC1D28Q2M2D7 AC010525.1-201ENST00000585559 441 ntBASIC19.03■□□□□ 0.64
TBC1D28Q2M2D7 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms