Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.05■□□□□ 0.8
CDC42P60953 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDC42P60953 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CDC42P60953 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.05■□□□□ 0.8
CDC42P60953 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDC42P60953 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDC42P60953 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDC42P60953 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CDC42P60953 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDC42P60953 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CDC42P60953 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDC42P60953 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CDC42P60953 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDC42P60953 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDC42P60953 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDC42P60953 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDC42P60953 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDC42P60953 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDC42P60953 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDC42P60953 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDC42P60953 FAM99A-202ENST00000538190 1989 ntBASIC20.04■□□□□ 0.8
CDC42P60953 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDC42P60953 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDC42P60953 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.04■□□□□ 0.8
CDC42P60953 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.04■□□□□ 0.8
CDC42P60953 AF131216.4-201ENST00000638924 1588 ntBASIC20.04■□□□□ 0.8
CDC42P60953 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.04■□□□□ 0.8
CDC42P60953 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CDC42P60953 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDC42P60953 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDC42P60953 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CDC42P60953 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDC42P60953 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDC42P60953 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC20.03■□□□□ 0.8
CDC42P60953 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDC42P60953 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDC42P60953 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDC42P60953 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.03■□□□□ 0.8
CDC42P60953 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CDC42P60953 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDC42P60953 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDC42P60953 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDC42P60953 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CDC42P60953 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDC42P60953 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDC42P60953 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CDC42P60953 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
CDC42P60953 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CDC42P60953 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.02■□□□□ 0.8
CDC42P60953 AC120024.1-201ENST00000562672 995 ntBASIC20.02■□□□□ 0.8
CDC42P60953 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.02■□□□□ 0.8
CDC42P60953 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.02■□□□□ 0.8
CDC42P60953 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDC42P60953 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.02■□□□□ 0.8
CDC42P60953 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDC42P60953 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.02■□□□□ 0.79
CDC42P60953 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CDC42P60953 AC010542.4-201ENST00000563151 1910 ntBASIC20.02■□□□□ 0.79
CDC42P60953 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
CDC42P60953 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
CDC42P60953 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.02■□□□□ 0.79
CDC42P60953 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.01■□□□□ 0.79
CDC42P60953 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDC42P60953 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC20.01■□□□□ 0.79
CDC42P60953 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
CDC42P60953 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDC42P60953 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDC42P60953 AC129492.7-201ENST00000622992 756 ntBASIC20.01■□□□□ 0.79
CDC42P60953 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
CDC42P60953 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDC42P60953 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDC42P60953 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDC42P60953 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
CDC42P60953 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.01■□□□□ 0.79
CDC42P60953 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
CDC42P60953 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CDC42P60953 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CDC42P60953 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDC42P60953 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDC42P60953 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDC42P60953 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDC42P60953 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20■□□□□ 0.79
CDC42P60953 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
CDC42P60953 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20■□□□□ 0.79
CDC42P60953 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
CDC42P60953 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CDC42P60953 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
CDC42P60953 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDC42P60953 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20■□□□□ 0.79
CDC42P60953 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDC42P60953 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDC42P60953 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDC42P60953 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CDC42P60953 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CDC42P60953 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CDC42P60953 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
CDC42P60953 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
CDC42P60953 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CDC42P60953 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDC42P60953 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms