Protein–RNA interactions for Protein: P60842

EIF4A1, Eukaryotic initiation factor 4A-I, humanhuman

Known RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1P60842 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC28.36■■■□□ 2.13
EIF4A1P60842 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC28.36■■■□□ 2.13
EIF4A1P60842 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
EIF4A1P60842 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
EIF4A1P60842 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
EIF4A1P60842 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
EIF4A1P60842 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
EIF4A1P60842 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
EIF4A1P60842 AC093323.1-202ENST00000635031 2045 ntBASIC28.35■■■□□ 2.13
EIF4A1P60842 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC28.35■■■□□ 2.13
EIF4A1P60842 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC28.35■■■□□ 2.13
EIF4A1P60842 KRT18P5-201ENST00000436075 1291 ntBASIC28.35■■■□□ 2.13
EIF4A1P60842 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
EIF4A1P60842 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC28.35■■■□□ 2.13
EIF4A1P60842 TERF1P2-201ENST00000583350 1212 ntBASIC28.35■■■□□ 2.13
EIF4A1P60842 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC28.35■■■□□ 2.13
EIF4A1P60842 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC28.35■■■□□ 2.13
EIF4A1P60842 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
EIF4A1P60842 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC28.34■■■□□ 2.13
EIF4A1P60842 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC28.34■■■□□ 2.13
EIF4A1P60842 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC28.34■■■□□ 2.13
EIF4A1P60842 NT5C3AP1-201ENST00000394500 1012 ntBASIC28.34■■■□□ 2.13
EIF4A1P60842 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC28.34■■■□□ 2.13
EIF4A1P60842 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
EIF4A1P60842 DUSP8P3-201ENST00000399571 1760 ntBASIC28.34■■■□□ 2.13
EIF4A1P60842 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC28.34■■■□□ 2.13
EIF4A1P60842 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC28.34■■■□□ 2.13
EIF4A1P60842 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC28.33■■■□□ 2.13
EIF4A1P60842 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC28.33■■■□□ 2.13
EIF4A1P60842 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC28.33■■■□□ 2.13
EIF4A1P60842 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC28.33■■■□□ 2.13
EIF4A1P60842 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC28.33■■■□□ 2.13
EIF4A1P60842 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
EIF4A1P60842 AC010141.3-201ENST00000456659 717 ntBASIC28.33■■■□□ 2.13
EIF4A1P60842 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC28.33■■■□□ 2.13
EIF4A1P60842 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC28.33■■■□□ 2.13
EIF4A1P60842 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC28.33■■■□□ 2.13
EIF4A1P60842 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
EIF4A1P60842 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC28.33■■■□□ 2.13
EIF4A1P60842 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
EIF4A1P60842 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC28.33■■■□□ 2.12
EIF4A1P60842 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC28.32■■■□□ 2.12
EIF4A1P60842 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC28.32■■■□□ 2.12
EIF4A1P60842 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
EIF4A1P60842 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC28.32■■■□□ 2.12
EIF4A1P60842 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC28.32■■■□□ 2.12
EIF4A1P60842 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
EIF4A1P60842 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC28.31■■■□□ 2.12
EIF4A1P60842 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC28.31■■■□□ 2.12
EIF4A1P60842 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
EIF4A1P60842 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
EIF4A1P60842 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC28.31■■■□□ 2.12
EIF4A1P60842 LINC02228-203ENST00000641970 1355 ntBASIC28.31■■■□□ 2.12
EIF4A1P60842 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
EIF4A1P60842 USP45-205ENST00000472914 1617 ntTSL 5 BASIC28.31■■■□□ 2.12
EIF4A1P60842 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC28.31■■■□□ 2.12
EIF4A1P60842 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
EIF4A1P60842 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC28.31■■■□□ 2.12
EIF4A1P60842 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC28.31■■■□□ 2.12
EIF4A1P60842 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
EIF4A1P60842 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC28.3■■■□□ 2.12
EIF4A1P60842 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC28.3■■■□□ 2.12
EIF4A1P60842 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
EIF4A1P60842 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
EIF4A1P60842 GLI3-203ENST00000437480 451 ntTSL 2 BASIC28.3■■■□□ 2.12
EIF4A1P60842 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
EIF4A1P60842 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
EIF4A1P60842 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
EIF4A1P60842 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC28.29■■■□□ 2.12
EIF4A1P60842 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC28.29■■■□□ 2.12
EIF4A1P60842 MFF-208ENST00000409616 1247 ntTSL 5 BASIC28.29■■■□□ 2.12
EIF4A1P60842 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
EIF4A1P60842 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC28.29■■■□□ 2.12
EIF4A1P60842 KRT18P14-201ENST00000534205 1250 ntBASIC28.29■■■□□ 2.12
EIF4A1P60842 SMUG1P1-201ENST00000590640 811 ntBASIC28.29■■■□□ 2.12
EIF4A1P60842 TPRG1LP1-201ENST00000598702 760 ntBASIC28.29■■■□□ 2.12
EIF4A1P60842 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
EIF4A1P60842 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC28.29■■■□□ 2.12
EIF4A1P60842 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
EIF4A1P60842 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC28.28■■■□□ 2.12
EIF4A1P60842 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC28.28■■■□□ 2.12
EIF4A1P60842 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC28.28■■■□□ 2.12
EIF4A1P60842 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
EIF4A1P60842 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC28.28■■■□□ 2.12
EIF4A1P60842 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
EIF4A1P60842 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC28.28■■■□□ 2.12
EIF4A1P60842 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC28.28■■■□□ 2.12
EIF4A1P60842 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
EIF4A1P60842 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC28.27■■■□□ 2.12
EIF4A1P60842 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
EIF4A1P60842 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
EIF4A1P60842 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
EIF4A1P60842 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
EIF4A1P60842 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC28.27■■■□□ 2.12
EIF4A1P60842 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
EIF4A1P60842 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC28.27■■■□□ 2.12
EIF4A1P60842 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
EIF4A1P60842 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
EIF4A1P60842 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC28.26■■■□□ 2.12
EIF4A1P60842 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC28.26■■■□□ 2.12
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms