Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 AL353803.4-201ENST00000565882 1934 ntBASIC18.86■□□□□ 0.61
AP3S2P59780 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
AP3S2P59780 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.86■□□□□ 0.61
AP3S2P59780 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
AP3S2P59780 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.86■□□□□ 0.61
AP3S2P59780 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
AP3S2P59780 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC18.86■□□□□ 0.61
AP3S2P59780 GFER-205ENST00000569451 517 ntTSL 5 BASIC18.86■□□□□ 0.61
AP3S2P59780 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.86■□□□□ 0.61
AP3S2P59780 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
AP3S2P59780 AC087742.1-201ENST00000575880 1738 ntBASIC18.86■□□□□ 0.61
AP3S2P59780 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
AP3S2P59780 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
AP3S2P59780 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
AP3S2P59780 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
AP3S2P59780 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC18.85■□□□□ 0.61
AP3S2P59780 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
AP3S2P59780 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
AP3S2P59780 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
AP3S2P59780 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
AP3S2P59780 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
AP3S2P59780 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
AP3S2P59780 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.85■□□□□ 0.61
AP3S2P59780 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
AP3S2P59780 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC18.85■□□□□ 0.61
AP3S2P59780 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
AP3S2P59780 AC005229.4-201ENST00000610085 2198 ntBASIC18.85■□□□□ 0.61
AP3S2P59780 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
AP3S2P59780 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
AP3S2P59780 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
AP3S2P59780 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
AP3S2P59780 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
AP3S2P59780 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
AP3S2P59780 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
AP3S2P59780 AC026202.3-201ENST00000600805 1127 ntBASIC18.84■□□□□ 0.61
AP3S2P59780 RAP2CP1-202ENST00000605179 643 ntBASIC18.84■□□□□ 0.61
AP3S2P59780 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
AP3S2P59780 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
AP3S2P59780 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
AP3S2P59780 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
AP3S2P59780 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
AP3S2P59780 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
AP3S2P59780 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC18.84■□□□□ 0.61
AP3S2P59780 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
AP3S2P59780 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
AP3S2P59780 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.83■□□□□ 0.61
AP3S2P59780 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.83■□□□□ 0.61
AP3S2P59780 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
AP3S2P59780 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
AP3S2P59780 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
AP3S2P59780 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
AP3S2P59780 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
AP3S2P59780 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
AP3S2P59780 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
AP3S2P59780 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
AP3S2P59780 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
AP3S2P59780 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.83■□□□□ 0.6
AP3S2P59780 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
AP3S2P59780 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
AP3S2P59780 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
AP3S2P59780 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
AP3S2P59780 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
AP3S2P59780 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
AP3S2P59780 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
AP3S2P59780 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
AP3S2P59780 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
AP3S2P59780 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
AP3S2P59780 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
AP3S2P59780 AC007029.1-201ENST00000604183 313 ntBASIC18.82■□□□□ 0.6
AP3S2P59780 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
AP3S2P59780 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.82■□□□□ 0.6
AP3S2P59780 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
AP3S2P59780 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
AP3S2P59780 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
AP3S2P59780 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
AP3S2P59780 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
AP3S2P59780 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
AP3S2P59780 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
AP3S2P59780 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
AP3S2P59780 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
AP3S2P59780 AC131274.2-201ENST00000580697 1507 ntBASIC18.81■□□□□ 0.6
AP3S2P59780 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
AP3S2P59780 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.81■□□□□ 0.6
AP3S2P59780 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
AP3S2P59780 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
AP3S2P59780 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
AP3S2P59780 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
AP3S2P59780 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
AP3S2P59780 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.81■□□□□ 0.6
AP3S2P59780 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
AP3S2P59780 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.81■□□□□ 0.6
AP3S2P59780 AC092667.1-201ENST00000434301 2586 ntBASIC18.81■□□□□ 0.6
AP3S2P59780 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
AP3S2P59780 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
AP3S2P59780 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.8■□□□□ 0.6
AP3S2P59780 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
AP3S2P59780 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
AP3S2P59780 AC244015.2-201ENST00000616358 1861 ntBASIC18.8■□□□□ 0.6
AP3S2P59780 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
AP3S2P59780 METRNL-202ENST00000570778 967 ntTSL 5 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms