Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
CLDN2P57739 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.81■■□□□ 1.08
CLDN2P57739 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.8■■□□□ 1.08
CLDN2P57739 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.8■■□□□ 1.08
CLDN2P57739 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLDN2P57739 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CLDN2P57739 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.8■■□□□ 1.08
CLDN2P57739 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLDN2P57739 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLDN2P57739 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.8■■□□□ 1.08
CLDN2P57739 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.8■■□□□ 1.08
CLDN2P57739 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CLDN2P57739 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.8■■□□□ 1.08
CLDN2P57739 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.8■■□□□ 1.08
CLDN2P57739 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.8■■□□□ 1.08
CLDN2P57739 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLDN2P57739 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CLDN2P57739 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLDN2P57739 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.79■■□□□ 1.08
CLDN2P57739 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CLDN2P57739 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLDN2P57739 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
CLDN2P57739 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.79■■□□□ 1.08
CLDN2P57739 KRT18P14-201ENST00000534205 1250 ntBASIC21.79■■□□□ 1.08
CLDN2P57739 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.79■■□□□ 1.08
CLDN2P57739 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.79■■□□□ 1.08
CLDN2P57739 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLDN2P57739 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.79■■□□□ 1.08
CLDN2P57739 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLDN2P57739 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
CLDN2P57739 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLDN2P57739 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.78■■□□□ 1.08
CLDN2P57739 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.78■■□□□ 1.08
CLDN2P57739 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLDN2P57739 LINC02228-203ENST00000641970 1355 ntBASIC21.78■■□□□ 1.08
CLDN2P57739 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.78■■□□□ 1.08
CLDN2P57739 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
CLDN2P57739 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.78■■□□□ 1.08
CLDN2P57739 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.78■■□□□ 1.08
CLDN2P57739 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLDN2P57739 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLDN2P57739 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLDN2P57739 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CLDN2P57739 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CLDN2P57739 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.77■■□□□ 1.08
CLDN2P57739 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.77■■□□□ 1.08
CLDN2P57739 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.77■■□□□ 1.08
CLDN2P57739 TERF1P2-201ENST00000583350 1212 ntBASIC21.77■■□□□ 1.08
CLDN2P57739 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CLDN2P57739 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
CLDN2P57739 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.77■■□□□ 1.08
CLDN2P57739 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CLDN2P57739 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
CLDN2P57739 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
CLDN2P57739 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
CLDN2P57739 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.77■■□□□ 1.07
CLDN2P57739 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
CLDN2P57739 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.76■■□□□ 1.07
CLDN2P57739 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLDN2P57739 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.76■■□□□ 1.07
CLDN2P57739 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLDN2P57739 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CLDN2P57739 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLDN2P57739 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.76■■□□□ 1.07
CLDN2P57739 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CLDN2P57739 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CLDN2P57739 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.76■■□□□ 1.07
CLDN2P57739 ANOS2P-203ENST00000472227 1816 ntBASIC21.76■■□□□ 1.07
CLDN2P57739 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLDN2P57739 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLDN2P57739 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLDN2P57739 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.75■■□□□ 1.07
CLDN2P57739 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
CLDN2P57739 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CLDN2P57739 NTF6G-201ENST00000591094 616 ntBASIC21.75■■□□□ 1.07
CLDN2P57739 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLDN2P57739 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLDN2P57739 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLDN2P57739 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CLDN2P57739 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.74■■□□□ 1.07
CLDN2P57739 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
CLDN2P57739 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.74■■□□□ 1.07
CLDN2P57739 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLDN2P57739 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CLDN2P57739 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
CLDN2P57739 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.74■■□□□ 1.07
CLDN2P57739 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CLDN2P57739 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.74■■□□□ 1.07
CLDN2P57739 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CLDN2P57739 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLDN2P57739 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.73■■□□□ 1.07
CLDN2P57739 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLDN2P57739 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLDN2P57739 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
CLDN2P57739 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLDN2P57739 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.73■■□□□ 1.07
CLDN2P57739 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.73■■□□□ 1.07
CLDN2P57739 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.73■■□□□ 1.07
CLDN2P57739 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLDN2P57739 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms