Protein–RNA interactions for Protein: P54860

UFD2, E4 ubiquitin-protein ligase UFD2, yeastyeast

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD2P54860 WRS1YOL097C 1299 nt5.95□□□□□ -1.46
UFD2P54860 CUE5YOR042W 1236 nt5.95□□□□□ -1.46
UFD2P54860 TUM1YOR251C 915 nt5.95□□□□□ -1.46
UFD2P54860 YOR338WYOR338W 1092 nt5.95□□□□□ -1.46
UFD2P54860 YPL162CYPL162C 822 nt5.95□□□□□ -1.46
UFD2P54860 YBR071WYBR071W 636 nt5.95□□□□□ -1.46
UFD2P54860 BI3Q0115 1554 nt5.94□□□□□ -1.46
UFD2P54860 RSM28YDR494W 1086 nt5.94□□□□□ -1.46
UFD2P54860 MTC7YEL033W 420 nt5.94□□□□□ -1.46
UFD2P54860 LSM4YER112W 564 nt5.94□□□□□ -1.46
UFD2P54860 IKI1YHR187W 930 nt5.94□□□□□ -1.46
UFD2P54860 YJL147CYJL147C 1149 nt5.94□□□□□ -1.46
UFD2P54860 BUD28YLR062C 378 nt5.94□□□□□ -1.46
UFD2P54860 YNL144W-AYNL144W-A 84 nt5.94□□□□□ -1.46
UFD2P54860 SYC1YOR179C 567 nt5.94□□□□□ -1.46
UFD2P54860 RPL21BYPL079W 483 nt5.94□□□□□ -1.46
UFD2P54860 MRPL27YBR282W 441 nt5.94□□□□□ -1.46
UFD2P54860 YIR007WYIR007W 2295 nt5.94□□□□□ -1.46
UFD2P54860 VMA13YPR036W 1437 nt5.93□□□□□ -1.46
UFD2P54860 YDL016CYDL016C 303 nt5.93□□□□□ -1.46
UFD2P54860 RPL35BYDL136W 363 nt5.93□□□□□ -1.46
UFD2P54860 YDR396WYDR396W 501 nt5.93□□□□□ -1.46
UFD2P54860 UTR4YEL038W 684 nt5.93□□□□□ -1.46
UFD2P54860 SCM4YGR049W 564 nt5.93□□□□□ -1.46
UFD2P54860 YGR115CYGR115C 780 nt5.93□□□□□ -1.46
UFD2P54860 PTI1YGR156W 1278 nt5.93□□□□□ -1.46
UFD2P54860 YAL056C-AYAL056C-A 351 nt5.93□□□□□ -1.46
UFD2P54860 YML047W-AYML047W-A 366 nt5.93□□□□□ -1.46
UFD2P54860 FMP41YNL168C 780 nt5.93□□□□□ -1.46
UFD2P54860 HNT3YOR258W 654 nt5.93□□□□□ -1.46
UFD2P54860 RRG7YOR305W 729 nt5.93□□□□□ -1.46
UFD2P54860 SUB2YDL084W 1341 nt5.93□□□□□ -1.46
UFD2P54860 NSA1YGL111W 1392 nt5.93□□□□□ -1.46
UFD2P54860 RTK1YDL025C 1863 nt5.92□□□□□ -1.46
UFD2P54860 GCS1YDL226C 1059 nt5.92□□□□□ -1.46
UFD2P54860 GRX3YDR098C 858 nt5.92□□□□□ -1.46
UFD2P54860 RPN12YFR052W 825 nt5.92□□□□□ -1.46
UFD2P54860 NAT2YGR147C 867 nt5.92□□□□□ -1.46
UFD2P54860 STE18YJR086W 333 nt5.92□□□□□ -1.46
UFD2P54860 IME1YJR094C 1083 nt5.92□□□□□ -1.46
UFD2P54860 PRX1YBL064C 786 nt5.92□□□□□ -1.46
UFD2P54860 RPA49YNL248C 1248 nt5.92□□□□□ -1.46
UFD2P54860 POP7YBR167C 423 nt5.92□□□□□ -1.46
UFD2P54860 RIB5YBR256C 717 nt5.92□□□□□ -1.46
UFD2P54860 BRF1YGR246C 1791 nt5.92□□□□□ -1.46
UFD2P54860 MTH1YDR277C 1302 nt5.92□□□□□ -1.46
UFD2P54860 GZF3YJL110C 1656 nt5.91□□□□□ -1.46
UFD2P54860 UBC9YDL064W 474 nt5.91□□□□□ -1.46
UFD2P54860 SPR28YDR218C 1272 nt5.91□□□□□ -1.46
UFD2P54860 ERD1YDR414C 1089 nt5.91□□□□□ -1.46
UFD2P54860 tR(ACG)JtR(ACG)J 73 nt5.91□□□□□ -1.46
UFD2P54860 RHO4YKR055W 876 nt5.91□□□□□ -1.46
UFD2P54860 IZH2YOL002C 954 nt5.91□□□□□ -1.46
UFD2P54860 YOL013W-BYOL013W-B 291 nt5.91□□□□□ -1.46
UFD2P54860 USV1YPL230W 1176 nt5.91□□□□□ -1.46
UFD2P54860 SCD6YPR129W 1050 nt5.91□□□□□ -1.46
UFD2P54860 YPR145C-AYPR145C-A 237 nt5.91□□□□□ -1.46
UFD2P54860 NOP2YNL061W 1857 nt5.91□□□□□ -1.46
UFD2P54860 FOL1YNL256W 2475 nt5.91□□□□□ -1.46
UFD2P54860 PMA1YGL008C 2757 nt5.91□□□□□ -1.46
UFD2P54860 MMT1YMR177W 1533 nt5.9□□□□□ -1.46
UFD2P54860 DUR1,2YBR208C 5508 nt5.9□□□□□ -1.46
UFD2P54860 TGL2YDR058C 981 nt5.9□□□□□ -1.46
UFD2P54860 OCA6YDR067C 675 nt5.9□□□□□ -1.46
UFD2P54860 COS12YGL263W 1143 nt5.9□□□□□ -1.46
UFD2P54860 TDA10YGR205W 873 nt5.9□□□□□ -1.46
UFD2P54860 YIR023C-AYIR023C-A 324 nt5.9□□□□□ -1.46
UFD2P54860 TEF4YKL081W 1239 nt5.9□□□□□ -1.46
UFD2P54860 RLP24YLR009W 600 nt5.9□□□□□ -1.46
UFD2P54860 IMP2YMR035W 534 nt5.9□□□□□ -1.46
UFD2P54860 OXR1YPL196W 822 nt5.9□□□□□ -1.46
UFD2P54860 TKL1YPR074C 2043 nt5.9□□□□□ -1.47
UFD2P54860 SPR3YGR059W 1539 nt5.89□□□□□ -1.47
UFD2P54860 NSE4YDL105W 1209 nt5.89□□□□□ -1.47
UFD2P54860 YGL109WYGL109W 324 nt5.89□□□□□ -1.47
UFD2P54860 PRS3YHL011C 963 nt5.89□□□□□ -1.47
UFD2P54860 SYS1YJL004C 612 nt5.89□□□□□ -1.47
UFD2P54860 YBL059WYBL059W 582 nt5.89□□□□□ -1.47
UFD2P54860 TOM7YNL070W 183 nt5.89□□□□□ -1.47
UFD2P54860 ATP19YOL077W-A 207 nt5.89□□□□□ -1.47
UFD2P54860 DGA1YOR245C 1257 nt5.89□□□□□ -1.47
UFD2P54860 YDR210W-AYDR210W-A 1317 nt5.89□□□□□ -1.47
UFD2P54860 RPT4YOR259C 1314 nt5.89□□□□□ -1.47
UFD2P54860 HPF1YOL155C 2904 nt5.89□□□□□ -1.47
UFD2P54860 ENT1YDL161W 1365 nt5.89□□□□□ -1.47
UFD2P54860 CCZ1YBR131W 2115 nt5.89□□□□□ -1.47
UFD2P54860 YCR001WYCR001W 315 nt5.88□□□□□ -1.47
UFD2P54860 YCR101CYCR101C 549 nt5.88□□□□□ -1.47
UFD2P54860 VCX1YDL128W 1236 nt5.88□□□□□ -1.47
UFD2P54860 ERV29YGR284C 933 nt5.88□□□□□ -1.47
UFD2P54860 GCD14YJL125C 1152 nt5.88□□□□□ -1.47
UFD2P54860 YLR217WYLR217W 324 nt5.88□□□□□ -1.47
UFD2P54860 DLT1YMR126C 1029 nt5.88□□□□□ -1.47
UFD2P54860 BRE2YLR015W 1518 nt5.88□□□□□ -1.47
UFD2P54860 RFA1YAR007C 1866 nt5.88□□□□□ -1.47
UFD2P54860 FLC3YGL139W 2409 nt5.87□□□□□ -1.47
UFD2P54860 YGL006W-AYGL006W-A 111 nt5.87□□□□□ -1.47
UFD2P54860 PGD1YGL025C 1194 nt5.87□□□□□ -1.47
UFD2P54860 NAG1YGR031C-A 492 nt5.87□□□□□ -1.47
UFD2P54860 GTR2YGR163W 1026 nt5.87□□□□□ -1.47
Retrieved 100 of 7,029 protein–RNA pairs in 24.9 ms