Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.49■□□□□ 0.87
SMSP52788 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.49■□□□□ 0.87
SMSP52788 MIR939-201ENST00000401314 82 ntBASIC20.49■□□□□ 0.87
SMSP52788 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.49■□□□□ 0.87
SMSP52788 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SMSP52788 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SMSP52788 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.49■□□□□ 0.87
SMSP52788 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.49■□□□□ 0.87
SMSP52788 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMSP52788 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMSP52788 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SMSP52788 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SMSP52788 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
SMSP52788 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SMSP52788 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.48■□□□□ 0.87
SMSP52788 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SMSP52788 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SMSP52788 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
SMSP52788 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.48■□□□□ 0.87
SMSP52788 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SMSP52788 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SMSP52788 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
SMSP52788 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
SMSP52788 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
SMSP52788 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SMSP52788 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SMSP52788 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
SMSP52788 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
SMSP52788 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SMSP52788 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.47■□□□□ 0.87
SMSP52788 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SMSP52788 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.47■□□□□ 0.87
SMSP52788 AP001330.3-201ENST00000520123 633 ntBASIC20.47■□□□□ 0.87
SMSP52788 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SMSP52788 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.47■□□□□ 0.87
SMSP52788 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SMSP52788 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SMSP52788 AC131274.2-201ENST00000580697 1507 ntBASIC20.47■□□□□ 0.87
SMSP52788 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SMSP52788 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SMSP52788 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SMSP52788 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SMSP52788 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SMSP52788 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SMSP52788 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SMSP52788 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.46■□□□□ 0.87
SMSP52788 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SMSP52788 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SMSP52788 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SMSP52788 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.46■□□□□ 0.87
SMSP52788 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SMSP52788 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SMSP52788 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
SMSP52788 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SMSP52788 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SMSP52788 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SMSP52788 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SMSP52788 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
SMSP52788 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SMSP52788 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SMSP52788 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SMSP52788 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
SMSP52788 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.45■□□□□ 0.86
SMSP52788 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.45■□□□□ 0.86
SMSP52788 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SMSP52788 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SMSP52788 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.45■□□□□ 0.86
SMSP52788 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.45■□□□□ 0.86
SMSP52788 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.45■□□□□ 0.86
SMSP52788 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.45■□□□□ 0.86
SMSP52788 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.45■□□□□ 0.86
SMSP52788 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.45■□□□□ 0.86
SMSP52788 MIR6821-201ENST00000617625 74 ntBASIC20.45■□□□□ 0.86
SMSP52788 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SMSP52788 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SMSP52788 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SMSP52788 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.45■□□□□ 0.86
SMSP52788 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.45■□□□□ 0.86
SMSP52788 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.45■□□□□ 0.86
SMSP52788 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SMSP52788 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SMSP52788 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SMSP52788 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
SMSP52788 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.44■□□□□ 0.86
SMSP52788 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SMSP52788 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SMSP52788 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SMSP52788 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
SMSP52788 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SMSP52788 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.44■□□□□ 0.86
SMSP52788 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMSP52788 PKD1P6-201ENST00000343738 4769 ntBASIC20.43■□□□□ 0.86
SMSP52788 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
SMSP52788 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMSP52788 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMSP52788 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.43■□□□□ 0.86
SMSP52788 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMSP52788 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
SMSP52788 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.43■□□□□ 0.86
SMSP52788 RASA4CP-201ENST00000424092 1398 ntBASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms