Protein–RNA interactions for Protein: P47098

TY1B-JR1, Transposon Ty1-JR1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-JR1P47098 CUE3YGL110C 1875 nt4.8□□□□□ -1.64
TY1B-JR1P47098 IKI3YLR384C 4050 nt4.8□□□□□ -1.64
TY1B-JR1P47098 DPB2YPR175W 2070 nt4.8□□□□□ -1.64
TY1B-JR1P47098 STR2YJR130C 1920 nt4.8□□□□□ -1.64
TY1B-JR1P47098 SIS2YKR072C 1689 nt4.8□□□□□ -1.64
TY1B-JR1P47098 FRE8YLR047C 2061 nt4.79□□□□□ -1.64
TY1B-JR1P47098 PAP2YOL115W 1755 nt4.79□□□□□ -1.64
TY1B-JR1P47098 PRP43YGL120C 2304 nt4.79□□□□□ -1.64
TY1B-JR1P47098 REE1YJL217W 597 nt4.78□□□□□ -1.64
TY1B-JR1P47098 SHG1YBR258C 429 nt4.78□□□□□ -1.64
TY1B-JR1P47098 DHR2YKL078W 2208 nt4.78□□□□□ -1.64
TY1B-JR1P47098 PDR12YPL058C 4536 nt4.78□□□□□ -1.64
TY1B-JR1P47098 SSB1YDL229W 1842 nt4.78□□□□□ -1.64
TY1B-JR1P47098 GAL11YOL051W 3246 nt4.78□□□□□ -1.64
TY1B-JR1P47098 EPL1YFL024C 2499 nt4.78□□□□□ -1.64
TY1B-JR1P47098 SEC53YFL045C 765 nt4.78□□□□□ -1.64
TY1B-JR1P47098 RPL18AYOL120C 561 nt4.78□□□□□ -1.64
TY1B-JR1P47098 STU2YLR045C 2667 nt4.78□□□□□ -1.64
TY1B-JR1P47098 YPL260WYPL260W 1656 nt4.77□□□□□ -1.65
TY1B-JR1P47098 FAA3YIL009W 2085 nt4.77□□□□□ -1.65
TY1B-JR1P47098 RPL23BYER117W 414 nt4.77□□□□□ -1.65
TY1B-JR1P47098 HOT1YMR172W 2160 nt4.77□□□□□ -1.65
TY1B-JR1P47098 GET1YGL020C 708 nt4.76□□□□□ -1.65
TY1B-JR1P47098 IMD4YML056C 1575 nt4.76□□□□□ -1.65
TY1B-JR1P47098 YOR331CYOR331C 558 nt4.76□□□□□ -1.65
TY1B-JR1P47098 YBL108WYBL108W 306 nt4.76□□□□□ -1.65
TY1B-JR1P47098 GEM1YAL048C 1989 nt4.75□□□□□ -1.65
TY1B-JR1P47098 YJR085CYJR085C 318 nt4.75□□□□□ -1.65
TY1B-JR1P47098 FAA2YER015W 2235 nt4.75□□□□□ -1.65
TY1B-JR1P47098 BCH1YMR237W 2175 nt4.75□□□□□ -1.65
TY1B-JR1P47098 VTH1YIL173W 4650 nt4.74□□□□□ -1.65
TY1B-JR1P47098 VTH2YJL222W 4650 nt4.74□□□□□ -1.65
TY1B-JR1P47098 RPC37YKR025W 849 nt4.74□□□□□ -1.65
TY1B-JR1P47098 AVT7YIL088C 1473 nt4.74□□□□□ -1.65
TY1B-JR1P47098 CHS3YBR023C 3498 nt4.74□□□□□ -1.65
TY1B-JR1P47098 MIG3YER028C 1185 nt4.73□□□□□ -1.65
TY1B-JR1P47098 RFM1YOR279C 933 nt4.73□□□□□ -1.65
TY1B-JR1P47098 POL31YJR006W 1464 nt4.73□□□□□ -1.65
TY1B-JR1P47098 ITC1YGL133W 3795 nt4.73□□□□□ -1.65
TY1B-JR1P47098 PRE1YER012W 597 nt4.73□□□□□ -1.65
TY1B-JR1P47098 DOG1YHR044C 741 nt4.72□□□□□ -1.65
TY1B-JR1P47098 NIT3YLR351C 876 nt4.72□□□□□ -1.65
TY1B-JR1P47098 COA2YPL189C-A 207 nt4.72□□□□□ -1.65
TY1B-JR1P47098 TIF4632YGL049C 2745 nt4.72□□□□□ -1.65
TY1B-JR1P47098 SSE2YBR169C 2082 nt4.72□□□□□ -1.65
TY1B-JR1P47098 ASI1YMR119W 1875 nt4.71□□□□□ -1.65
TY1B-JR1P47098 YPL113CYPL113C 1191 nt4.71□□□□□ -1.66
TY1B-JR1P47098 VPS64YDR200C 1815 nt4.71□□□□□ -1.66
TY1B-JR1P47098 ALA1YOR335C 2877 nt4.71□□□□□ -1.66
TY1B-JR1P47098 SUP45YBR143C 1314 nt4.7□□□□□ -1.66
TY1B-JR1P47098 GRC3YLL035W 1899 nt4.7□□□□□ -1.66
TY1B-JR1P47098 MDN1YLR106C 14733 nt4.7□□□□□ -1.66
TY1B-JR1P47098 RPO26YPR187W 468 nt4.7□□□□□ -1.66
TY1B-JR1P47098 MEK1YOR351C 1494 nt4.69□□□□□ -1.66
TY1B-JR1P47098 YOL153CYOL153C 1746 nt4.69□□□□□ -1.66
TY1B-JR1P47098 TLC1TLC1 1301 nt4.69□□□□□ -1.66
TY1B-JR1P47098 YGL074CYGL074C 327 nt4.69□□□□□ -1.66
TY1B-JR1P47098 YPR108W-AYPR108W-A 213 nt4.69□□□□□ -1.66
TY1B-JR1P47098 MUP3YHL036W 1641 nt4.68□□□□□ -1.66
TY1B-JR1P47098 RPB9YGL070C 369 nt4.68□□□□□ -1.66
TY1B-JR1P47098 YHL049CYHL049C 816 nt4.68□□□□□ -1.66
TY1B-JR1P47098 REC8YPR007C 2043 nt4.68□□□□□ -1.66
TY1B-JR1P47098 THI20YOL055C 1656 nt4.68□□□□□ -1.66
TY1B-JR1P47098 XRS2YDR369C 2565 nt4.68□□□□□ -1.66
TY1B-JR1P47098 TIP20YGL145W 2106 nt4.68□□□□□ -1.66
TY1B-JR1P47098 SKI6YGR195W 741 nt4.68□□□□□ -1.66
TY1B-JR1P47098 BCD1YHR040W 1101 nt4.68□□□□□ -1.66
TY1B-JR1P47098 RPL36BYPL249C-A 303 nt4.68□□□□□ -1.66
TY1B-JR1P47098 HBT1YDL223C 3141 nt4.67□□□□□ -1.66
TY1B-JR1P47098 YDL176WYDL176W 2127 nt4.67□□□□□ -1.66
TY1B-JR1P47098 HER2YMR293C 1395 nt4.67□□□□□ -1.66
TY1B-JR1P47098 YAK1YJL141C 2424 nt4.67□□□□□ -1.66
TY1B-JR1P47098 VPS41YDR080W 2979 nt4.67□□□□□ -1.66
TY1B-JR1P47098 RRN11YML043C 1524 nt4.67□□□□□ -1.66
TY1B-JR1P47098 SEC18YBR080C 2277 nt4.67□□□□□ -1.66
TY1B-JR1P47098 GPI10YGL142C 1851 nt4.66□□□□□ -1.66
TY1B-JR1P47098 PPH3YDR075W 927 nt4.66□□□□□ -1.66
TY1B-JR1P47098 CBT1YKL208W 816 nt4.66□□□□□ -1.66
TY1B-JR1P47098 RPS12YOR369C 432 nt4.66□□□□□ -1.66
TY1B-JR1P47098 YMR135W-AYMR135W-A 534 nt4.65□□□□□ -1.66
TY1B-JR1P47098 KCH1YJR054W 1494 nt4.65□□□□□ -1.66
TY1B-JR1P47098 NAM2YLR382C 2685 nt4.65□□□□□ -1.67
TY1B-JR1P47098 YAL004WYAL004W 648 nt4.65□□□□□ -1.67
TY1B-JR1P47098 GIS2YNL255C 462 nt4.65□□□□□ -1.67
TY1B-JR1P47098 RPN3YER021W 1572 nt4.65□□□□□ -1.67
TY1B-JR1P47098 NOP2YNL061W 1857 nt4.65□□□□□ -1.67
TY1B-JR1P47098 NAB6YML117W 3405 nt4.64□□□□□ -1.67
TY1B-JR1P47098 STE6YKL209C 3873 nt4.64□□□□□ -1.67
TY1B-JR1P47098 NUP133YKR082W 3474 nt4.64□□□□□ -1.67
TY1B-JR1P47098 FZF1YGL254W 900 nt4.64□□□□□ -1.67
TY1B-JR1P47098 YLR257WYLR257W 966 nt4.64□□□□□ -1.67
TY1B-JR1P47098 RIM21YNL294C 1602 nt4.64□□□□□ -1.67
TY1B-JR1P47098 NNK1YKL171W 2787 nt4.64□□□□□ -1.67
TY1B-JR1P47098 STV1YMR054W 2673 nt4.63□□□□□ -1.67
TY1B-JR1P47098 YER084WYER084W 387 nt4.63□□□□□ -1.67
TY1B-JR1P47098 CAX4YGR036C 720 nt4.63□□□□□ -1.67
TY1B-JR1P47098 GPI14YJR013W 1212 nt4.63□□□□□ -1.67
TY1B-JR1P47098 CDC40YDR364C 1368 nt4.62□□□□□ -1.67
TY1B-JR1P47098 GAS4YOL132W 1416 nt4.62□□□□□ -1.67
TY1B-JR1P47098 PRP28YDR243C 1767 nt4.62□□□□□ -1.67
Retrieved 100 of 7,029 protein–RNA pairs in 14.5 ms