Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SLC1A3P43003 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.17■□□□□ 0.82
SLC1A3P43003 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
SLC1A3P43003 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.16■□□□□ 0.82
SLC1A3P43003 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC1A3P43003 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.16■□□□□ 0.82
SLC1A3P43003 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
SLC1A3P43003 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC1A3P43003 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SLC1A3P43003 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
SLC1A3P43003 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.16■□□□□ 0.82
SLC1A3P43003 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.16■□□□□ 0.82
SLC1A3P43003 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.16■□□□□ 0.82
SLC1A3P43003 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.16■□□□□ 0.82
SLC1A3P43003 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
SLC1A3P43003 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SLC1A3P43003 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.16■□□□□ 0.82
SLC1A3P43003 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC1A3P43003 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
SLC1A3P43003 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.16■□□□□ 0.82
SLC1A3P43003 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC1A3P43003 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
SLC1A3P43003 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.15■□□□□ 0.82
SLC1A3P43003 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SLC1A3P43003 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
SLC1A3P43003 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.15■□□□□ 0.82
SLC1A3P43003 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.15■□□□□ 0.82
SLC1A3P43003 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.15■□□□□ 0.82
SLC1A3P43003 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.15■□□□□ 0.82
SLC1A3P43003 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.15■□□□□ 0.82
SLC1A3P43003 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SLC1A3P43003 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.15■□□□□ 0.82
SLC1A3P43003 AC242852.2-201ENST00000615738 1807 ntBASIC20.15■□□□□ 0.82
SLC1A3P43003 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
SLC1A3P43003 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
SLC1A3P43003 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
SLC1A3P43003 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLC1A3P43003 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.14■□□□□ 0.81
SLC1A3P43003 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SLC1A3P43003 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.14■□□□□ 0.81
SLC1A3P43003 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLC1A3P43003 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
SLC1A3P43003 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
SLC1A3P43003 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.14■□□□□ 0.81
SLC1A3P43003 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLC1A3P43003 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC1A3P43003 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC1A3P43003 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
SLC1A3P43003 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.13■□□□□ 0.81
SLC1A3P43003 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SLC1A3P43003 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.13■□□□□ 0.81
SLC1A3P43003 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.13■□□□□ 0.81
SLC1A3P43003 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC1A3P43003 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.13■□□□□ 0.81
SLC1A3P43003 AL512631.2-201ENST00000604634 923 ntBASIC20.13■□□□□ 0.81
SLC1A3P43003 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.13■□□□□ 0.81
SLC1A3P43003 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SLC1A3P43003 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.13■□□□□ 0.81
SLC1A3P43003 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC1A3P43003 ESRRAP2-201ENST00000418437 1549 ntBASIC20.12■□□□□ 0.81
SLC1A3P43003 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC1A3P43003 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC1A3P43003 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC1A3P43003 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SLC1A3P43003 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SLC1A3P43003 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.12■□□□□ 0.81
SLC1A3P43003 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC1A3P43003 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC1A3P43003 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC1A3P43003 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.12■□□□□ 0.81
SLC1A3P43003 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.12■□□□□ 0.81
SLC1A3P43003 SRD5A1P1-201ENST00000442297 786 ntBASIC20.12■□□□□ 0.81
SLC1A3P43003 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.12■□□□□ 0.81
SLC1A3P43003 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.12■□□□□ 0.81
SLC1A3P43003 AL499627.2-201ENST00000606283 725 ntBASIC20.12■□□□□ 0.81
SLC1A3P43003 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC1A3P43003 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.12■□□□□ 0.81
SLC1A3P43003 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC1A3P43003 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
SLC1A3P43003 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.12■□□□□ 0.81
SLC1A3P43003 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SLC1A3P43003 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.12■□□□□ 0.81
SLC1A3P43003 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
SLC1A3P43003 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.12■□□□□ 0.81
SLC1A3P43003 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.11■□□□□ 0.81
SLC1A3P43003 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
SLC1A3P43003 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SLC1A3P43003 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC1A3P43003 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC1A3P43003 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.11■□□□□ 0.81
SLC1A3P43003 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC1A3P43003 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SLC1A3P43003 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.11■□□□□ 0.81
SLC1A3P43003 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.11■□□□□ 0.81
SLC1A3P43003 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC1A3P43003 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
SLC1A3P43003 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
SLC1A3P43003 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC1A3P43003 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SLC1A3P43003 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms