Protein–RNA interactions for Protein: P34903

GABRA3, Gamma-aminobutyric acid receptor subunit alpha-3, humanhuman

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA3P34903 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
GABRA3P34903 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
GABRA3P34903 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
GABRA3P34903 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
GABRA3P34903 SYT6-210ENST00000641643 1587 ntBASIC20.43■□□□□ 0.86
GABRA3P34903 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
GABRA3P34903 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
GABRA3P34903 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.43■□□□□ 0.86
GABRA3P34903 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
GABRA3P34903 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
GABRA3P34903 DUX4L19-201ENST00000557448 1267 ntBASIC20.43■□□□□ 0.86
GABRA3P34903 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
GABRA3P34903 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
GABRA3P34903 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
GABRA3P34903 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
GABRA3P34903 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
GABRA3P34903 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
GABRA3P34903 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
GABRA3P34903 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
GABRA3P34903 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
GABRA3P34903 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
GABRA3P34903 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
GABRA3P34903 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
GABRA3P34903 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
GABRA3P34903 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
GABRA3P34903 AC008406.3-201ENST00000620001 1374 ntBASIC20.42■□□□□ 0.86
GABRA3P34903 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
GABRA3P34903 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
GABRA3P34903 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
GABRA3P34903 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
GABRA3P34903 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
GABRA3P34903 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
GABRA3P34903 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
GABRA3P34903 SERBP1P1-201ENST00000396021 1160 ntBASIC20.41■□□□□ 0.86
GABRA3P34903 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.41■□□□□ 0.86
GABRA3P34903 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.41■□□□□ 0.86
GABRA3P34903 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
GABRA3P34903 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
GABRA3P34903 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.41■□□□□ 0.86
GABRA3P34903 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
GABRA3P34903 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
GABRA3P34903 AC087742.1-201ENST00000575880 1738 ntBASIC20.41■□□□□ 0.86
GABRA3P34903 LINC01960-201ENST00000563759 1884 ntBASIC20.41■□□□□ 0.86
GABRA3P34903 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
GABRA3P34903 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
GABRA3P34903 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
GABRA3P34903 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
GABRA3P34903 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.4■□□□□ 0.86
GABRA3P34903 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
GABRA3P34903 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
GABRA3P34903 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
GABRA3P34903 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
GABRA3P34903 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.4■□□□□ 0.86
GABRA3P34903 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.4■□□□□ 0.86
GABRA3P34903 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
GABRA3P34903 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
GABRA3P34903 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
GABRA3P34903 AL117328.2-201ENST00000624617 1940 ntBASIC20.39■□□□□ 0.86
GABRA3P34903 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
GABRA3P34903 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
GABRA3P34903 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
GABRA3P34903 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
GABRA3P34903 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
GABRA3P34903 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
GABRA3P34903 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.39■□□□□ 0.85
GABRA3P34903 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
GABRA3P34903 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
GABRA3P34903 GUSBP5-202ENST00000510805 1989 ntBASIC20.39■□□□□ 0.85
GABRA3P34903 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
GABRA3P34903 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
GABRA3P34903 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
GABRA3P34903 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.39■□□□□ 0.85
GABRA3P34903 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
GABRA3P34903 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
GABRA3P34903 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
GABRA3P34903 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
GABRA3P34903 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.38■□□□□ 0.85
GABRA3P34903 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.38■□□□□ 0.85
GABRA3P34903 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
GABRA3P34903 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
GABRA3P34903 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
GABRA3P34903 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.37■□□□□ 0.85
GABRA3P34903 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
GABRA3P34903 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
GABRA3P34903 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GABRA3P34903 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.37■□□□□ 0.85
GABRA3P34903 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.37■□□□□ 0.85
GABRA3P34903 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GABRA3P34903 AL138724.1-201ENST00000606771 1088 ntBASIC20.37■□□□□ 0.85
GABRA3P34903 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
GABRA3P34903 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
GABRA3P34903 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
GABRA3P34903 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
GABRA3P34903 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
GABRA3P34903 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.37■□□□□ 0.85
GABRA3P34903 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
GABRA3P34903 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
GABRA3P34903 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.36■□□□□ 0.85
GABRA3P34903 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
GABRA3P34903 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms