Protein–RNA interactions for Protein: P27449

ATP6V0C, V-type proton ATPase 16 kDa proteolipid subunit, humanhuman

Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0CP27449 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
ATP6V0CP27449 GDI1-215ENST00000630693 786 ntTSL 4 BASIC17.57■□□□□ 0.4
ATP6V0CP27449 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATP6V0CP27449 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATP6V0CP27449 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ATP6V0CP27449 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATP6V0CP27449 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ATP6V0CP27449 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ATP6V0CP27449 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ATP6V0CP27449 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ATP6V0CP27449 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ATP6V0CP27449 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.56■□□□□ 0.4
ATP6V0CP27449 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATP6V0CP27449 AL157384.1-201ENST00000445995 2473 ntBASIC17.56■□□□□ 0.4
ATP6V0CP27449 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATP6V0CP27449 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
ATP6V0CP27449 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
ATP6V0CP27449 AC244015.2-201ENST00000616358 1861 ntBASIC17.56■□□□□ 0.4
ATP6V0CP27449 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
ATP6V0CP27449 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATP6V0CP27449 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATP6V0CP27449 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ATP6V0CP27449 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATP6V0CP27449 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATP6V0CP27449 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ATP6V0CP27449 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATP6V0CP27449 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATP6V0CP27449 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATP6V0CP27449 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATP6V0CP27449 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC17.55■□□□□ 0.4
ATP6V0CP27449 MIR3648-2-201ENST00000581792 180 ntBASIC17.55■□□□□ 0.4
ATP6V0CP27449 MIR3648-1-201ENST00000615959 180 ntBASIC17.55■□□□□ 0.4
ATP6V0CP27449 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATP6V0CP27449 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATP6V0CP27449 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATP6V0CP27449 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ATP6V0CP27449 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ATP6V0CP27449 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC17.54■□□□□ 0.4
ATP6V0CP27449 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATP6V0CP27449 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
ATP6V0CP27449 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
ATP6V0CP27449 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC17.54■□□□□ 0.4
ATP6V0CP27449 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
ATP6V0CP27449 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATP6V0CP27449 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC17.54■□□□□ 0.4
ATP6V0CP27449 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ATP6V0CP27449 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
ATP6V0CP27449 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC17.53■□□□□ 0.4
ATP6V0CP27449 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ATP6V0CP27449 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
ATP6V0CP27449 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATP6V0CP27449 LINC01521-201ENST00000504184 1943 ntBASIC17.53■□□□□ 0.4
ATP6V0CP27449 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATP6V0CP27449 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
ATP6V0CP27449 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
ATP6V0CP27449 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC17.52■□□□□ 0.4
ATP6V0CP27449 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATP6V0CP27449 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ATP6V0CP27449 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATP6V0CP27449 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC17.52■□□□□ 0.4
ATP6V0CP27449 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATP6V0CP27449 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATP6V0CP27449 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.39
ATP6V0CP27449 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC17.52■□□□□ 0.39
ATP6V0CP27449 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
ATP6V0CP27449 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
ATP6V0CP27449 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.52■□□□□ 0.39
ATP6V0CP27449 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
ATP6V0CP27449 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC17.51■□□□□ 0.39
ATP6V0CP27449 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATP6V0CP27449 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATP6V0CP27449 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC17.51■□□□□ 0.39
ATP6V0CP27449 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATP6V0CP27449 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATP6V0CP27449 MLEC-202ENST00000412616 841 ntTSL 3 BASIC17.51■□□□□ 0.39
ATP6V0CP27449 RPS2P7-201ENST00000447334 885 ntBASIC17.51■□□□□ 0.39
ATP6V0CP27449 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC17.51■□□□□ 0.39
ATP6V0CP27449 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC17.51■□□□□ 0.39
ATP6V0CP27449 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC17.51■□□□□ 0.39
ATP6V0CP27449 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATP6V0CP27449 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATP6V0CP27449 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC17.51■□□□□ 0.39
ATP6V0CP27449 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ATP6V0CP27449 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC17.51■□□□□ 0.39
ATP6V0CP27449 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATP6V0CP27449 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATP6V0CP27449 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ATP6V0CP27449 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATP6V0CP27449 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATP6V0CP27449 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATP6V0CP27449 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATP6V0CP27449 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC17.5■□□□□ 0.39
ATP6V0CP27449 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATP6V0CP27449 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATP6V0CP27449 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ATP6V0CP27449 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ATP6V0CP27449 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC17.5■□□□□ 0.39
ATP6V0CP27449 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATP6V0CP27449 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATP6V0CP27449 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms