Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCL1P22362 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCL1P22362 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.98■□□□□ 0.63
CCL1P22362 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
CCL1P22362 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.98■□□□□ 0.63
CCL1P22362 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.98■□□□□ 0.63
CCL1P22362 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCL1P22362 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.98■□□□□ 0.63
CCL1P22362 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC18.98■□□□□ 0.63
CCL1P22362 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC18.98■□□□□ 0.63
CCL1P22362 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC18.98■□□□□ 0.63
CCL1P22362 MIR6724-1-201ENST00000616420 92 ntBASIC18.98■□□□□ 0.63
CCL1P22362 MIR6724-2-201ENST00000616483 92 ntBASIC18.98■□□□□ 0.63
CCL1P22362 MIR6724-4-201ENST00000617390 92 ntBASIC18.98■□□□□ 0.63
CCL1P22362 MIR6724-3-201ENST00000622482 92 ntBASIC18.98■□□□□ 0.63
CCL1P22362 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
CCL1P22362 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCL1P22362 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.98■□□□□ 0.63
CCL1P22362 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCL1P22362 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.98■□□□□ 0.63
CCL1P22362 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCL1P22362 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CCL1P22362 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CCL1P22362 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCL1P22362 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCL1P22362 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCL1P22362 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.97■□□□□ 0.63
CCL1P22362 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCL1P22362 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.97■□□□□ 0.63
CCL1P22362 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
CCL1P22362 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC18.97■□□□□ 0.63
CCL1P22362 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.97■□□□□ 0.63
CCL1P22362 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCL1P22362 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCL1P22362 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CCL1P22362 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC18.97■□□□□ 0.63
CCL1P22362 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.97■□□□□ 0.63
CCL1P22362 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCL1P22362 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCL1P22362 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCL1P22362 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCL1P22362 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCL1P22362 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCL1P22362 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC18.96■□□□□ 0.63
CCL1P22362 UNC93B8-201ENST00000511903 705 ntBASIC18.96■□□□□ 0.63
CCL1P22362 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC18.96■□□□□ 0.63
CCL1P22362 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC18.96■□□□□ 0.63
CCL1P22362 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.96■□□□□ 0.63
CCL1P22362 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCL1P22362 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
CCL1P22362 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CCL1P22362 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCL1P22362 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.96■□□□□ 0.63
CCL1P22362 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCL1P22362 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCL1P22362 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCL1P22362 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCL1P22362 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.95■□□□□ 0.62
CCL1P22362 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCL1P22362 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCL1P22362 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCL1P22362 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCL1P22362 CREM-229ENST00000474362 1030 ntTSL 2 BASIC18.95■□□□□ 0.62
CCL1P22362 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.95■□□□□ 0.62
CCL1P22362 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CCL1P22362 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCL1P22362 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CCL1P22362 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCL1P22362 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.95■□□□□ 0.62
CCL1P22362 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCL1P22362 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCL1P22362 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCL1P22362 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCL1P22362 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCL1P22362 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
CCL1P22362 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCL1P22362 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCL1P22362 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCL1P22362 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCL1P22362 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCL1P22362 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCL1P22362 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
CCL1P22362 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCL1P22362 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCL1P22362 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
CCL1P22362 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCL1P22362 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.93■□□□□ 0.62
CCL1P22362 AL117332.1-201ENST00000622628 974 ntBASIC18.93■□□□□ 0.62
CCL1P22362 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCL1P22362 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCL1P22362 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCL1P22362 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCL1P22362 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCL1P22362 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCL1P22362 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCL1P22362 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCL1P22362 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCL1P22362 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCL1P22362 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCL1P22362 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms