Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
BMP4P12644 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
BMP4P12644 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.04■□□□□ 0.8
BMP4P12644 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
BMP4P12644 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
BMP4P12644 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
BMP4P12644 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
BMP4P12644 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
BMP4P12644 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
BMP4P12644 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
BMP4P12644 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
BMP4P12644 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
BMP4P12644 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.03■□□□□ 0.8
BMP4P12644 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
BMP4P12644 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.03■□□□□ 0.8
BMP4P12644 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.03■□□□□ 0.8
BMP4P12644 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
BMP4P12644 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
BMP4P12644 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.03■□□□□ 0.8
BMP4P12644 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.03■□□□□ 0.8
BMP4P12644 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
BMP4P12644 AC010997.5-201ENST00000609182 354 ntBASIC20.03■□□□□ 0.8
BMP4P12644 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
BMP4P12644 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
BMP4P12644 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
BMP4P12644 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
BMP4P12644 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.02■□□□□ 0.8
BMP4P12644 ESRRAP2-201ENST00000418437 1549 ntBASIC20.02■□□□□ 0.8
BMP4P12644 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
BMP4P12644 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
BMP4P12644 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
BMP4P12644 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.02■□□□□ 0.8
BMP4P12644 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.02■□□□□ 0.8
BMP4P12644 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
BMP4P12644 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.02■□□□□ 0.8
BMP4P12644 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.02■□□□□ 0.8
BMP4P12644 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
BMP4P12644 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
BMP4P12644 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
BMP4P12644 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
BMP4P12644 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
BMP4P12644 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
BMP4P12644 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
BMP4P12644 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BMP4P12644 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.01■□□□□ 0.79
BMP4P12644 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
BMP4P12644 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.01■□□□□ 0.79
BMP4P12644 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BMP4P12644 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BMP4P12644 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
BMP4P12644 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.01■□□□□ 0.79
BMP4P12644 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
BMP4P12644 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
BMP4P12644 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
BMP4P12644 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
BMP4P12644 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
BMP4P12644 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20■□□□□ 0.79
BMP4P12644 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
BMP4P12644 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20■□□□□ 0.79
BMP4P12644 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20■□□□□ 0.79
BMP4P12644 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20■□□□□ 0.79
BMP4P12644 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
BMP4P12644 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
BMP4P12644 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
BMP4P12644 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
BMP4P12644 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20■□□□□ 0.79
BMP4P12644 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
BMP4P12644 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.99■□□□□ 0.79
BMP4P12644 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
BMP4P12644 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
BMP4P12644 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
BMP4P12644 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
BMP4P12644 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.99■□□□□ 0.79
BMP4P12644 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.99■□□□□ 0.79
BMP4P12644 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
BMP4P12644 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.99■□□□□ 0.79
BMP4P12644 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.99■□□□□ 0.79
BMP4P12644 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
BMP4P12644 AC139530.1-201ENST00000575312 1977 ntBASIC19.99■□□□□ 0.79
BMP4P12644 AC090877.2-201ENST00000558441 1738 ntBASIC19.99■□□□□ 0.79
BMP4P12644 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
BMP4P12644 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
BMP4P12644 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
BMP4P12644 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
BMP4P12644 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
BMP4P12644 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.98■□□□□ 0.79
BMP4P12644 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.98■□□□□ 0.79
BMP4P12644 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
BMP4P12644 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.98■□□□□ 0.79
BMP4P12644 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.98■□□□□ 0.79
BMP4P12644 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
BMP4P12644 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
BMP4P12644 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
BMP4P12644 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
BMP4P12644 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
BMP4P12644 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.98■□□□□ 0.79
BMP4P12644 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
BMP4P12644 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
BMP4P12644 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
BMP4P12644 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms