Protein–RNA interactions for Protein: P05204

HMGN2, Non-histone chromosomal protein HMG-17, humanhuman

Known RBP Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P05204 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HMGN2P05204 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
HMGN2P05204 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HMGN2P05204 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HMGN2P05204 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
HMGN2P05204 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.53■□□□□ 0.88
HMGN2P05204 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
HMGN2P05204 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HMGN2P05204 AC006455.2-201ENST00000429931 906 ntBASIC20.53■□□□□ 0.88
HMGN2P05204 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.53■□□□□ 0.88
HMGN2P05204 AL512631.2-201ENST00000604634 923 ntBASIC20.53■□□□□ 0.88
HMGN2P05204 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HMGN2P05204 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
HMGN2P05204 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
HMGN2P05204 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.53■□□□□ 0.88
HMGN2P05204 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HMGN2P05204 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HMGN2P05204 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.53■□□□□ 0.88
HMGN2P05204 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
HMGN2P05204 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
HMGN2P05204 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HMGN2P05204 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HMGN2P05204 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.52■□□□□ 0.88
HMGN2P05204 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.52■□□□□ 0.88
HMGN2P05204 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HMGN2P05204 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HMGN2P05204 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.51■□□□□ 0.87
HMGN2P05204 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
HMGN2P05204 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.51■□□□□ 0.87
HMGN2P05204 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HMGN2P05204 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HMGN2P05204 SRD5A1P1-201ENST00000442297 786 ntBASIC20.51■□□□□ 0.87
HMGN2P05204 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.51■□□□□ 0.87
HMGN2P05204 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.51■□□□□ 0.87
HMGN2P05204 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.51■□□□□ 0.87
HMGN2P05204 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.51■□□□□ 0.87
HMGN2P05204 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HMGN2P05204 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HMGN2P05204 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HMGN2P05204 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.51■□□□□ 0.87
HMGN2P05204 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HMGN2P05204 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
HMGN2P05204 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.5■□□□□ 0.87
HMGN2P05204 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HMGN2P05204 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HMGN2P05204 AC139530.1-201ENST00000575312 1977 ntBASIC20.5■□□□□ 0.87
HMGN2P05204 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HMGN2P05204 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
HMGN2P05204 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HMGN2P05204 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
HMGN2P05204 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HMGN2P05204 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
HMGN2P05204 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HMGN2P05204 pRNA.6-201ENST00000610482 90 ntBASIC20.5■□□□□ 0.87
HMGN2P05204 pRNA.5-201ENST00000612139 90 ntBASIC20.5■□□□□ 0.87
HMGN2P05204 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.5■□□□□ 0.87
HMGN2P05204 pRNA.11-201ENST00000618423 90 ntBASIC20.5■□□□□ 0.87
HMGN2P05204 pRNA.13-201ENST00000619112 90 ntBASIC20.5■□□□□ 0.87
HMGN2P05204 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.5■□□□□ 0.87
HMGN2P05204 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
HMGN2P05204 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HMGN2P05204 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
HMGN2P05204 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HMGN2P05204 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.49■□□□□ 0.87
HMGN2P05204 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
HMGN2P05204 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HMGN2P05204 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HMGN2P05204 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.49■□□□□ 0.87
HMGN2P05204 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HMGN2P05204 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HMGN2P05204 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HMGN2P05204 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.49■□□□□ 0.87
HMGN2P05204 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.49■□□□□ 0.87
HMGN2P05204 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.49■□□□□ 0.87
HMGN2P05204 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.49■□□□□ 0.87
HMGN2P05204 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
HMGN2P05204 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
HMGN2P05204 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.49■□□□□ 0.87
HMGN2P05204 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HMGN2P05204 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
HMGN2P05204 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HMGN2P05204 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
HMGN2P05204 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HMGN2P05204 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
HMGN2P05204 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
HMGN2P05204 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HMGN2P05204 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.48■□□□□ 0.87
HMGN2P05204 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HMGN2P05204 AC133637.1-201ENST00000624115 1537 ntBASIC20.48■□□□□ 0.87
HMGN2P05204 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
HMGN2P05204 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HMGN2P05204 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
HMGN2P05204 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HMGN2P05204 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HMGN2P05204 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HMGN2P05204 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.48■□□□□ 0.87
HMGN2P05204 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.48■□□□□ 0.87
HMGN2P05204 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.48■□□□□ 0.87
HMGN2P05204 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.48■□□□□ 0.87
HMGN2P05204 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms